Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H16
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae f...    68   1e-11
U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae f...    66   3e-11
U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae ...    57   2e-08
Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical pr...    33   0.29 

>U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform b protein.
          Length = 151

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
 Frame = +1

Query: 217 VLXEIVSSEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN 396
           +L E  +   L      +  Q  +G+ S  + F +A  ++ SK   D+++GI+ L++L  
Sbjct: 6   ILEERTNPAVLMNAREQYMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLR 65

Query: 397 SHPE--GKRDYLFYLAIGNARIKEYXKALHYVKSFLEIEPXNQQVLALERXI 546
              +   KR+Y++YLA+ +ARIK+Y  AL Y+   L+ E  NQQ   L+  I
Sbjct: 66  DDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESI 117


>U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform a protein.
          Length = 138

 Score = 66.1 bits (154), Expect = 3e-11
 Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +1

Query: 268 FHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPE--GKRDYLFYLAI 441
           +  Q  +G+ S  + F +A  ++ SK   D+++GI+ L++L     +   KR+Y++YLA+
Sbjct: 10  YMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLRDDEDRTSKRNYVYYLAV 69

Query: 442 GNARIKEYXKALHYVKSFLEIEPXNQQVLALERXI 546
            +ARIK+Y  AL Y+   L+ E  NQQ   L+  I
Sbjct: 70  AHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESI 104


>U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae
           fis1-related protein1 protein.
          Length = 143

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +1

Query: 292 NVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN--SHPEGKRDYLFYLAIGNARIKEY 465
           +VS + Q   A  LV S+   +I++GI +L+++ +  +H E  R  + YLA+ +AR+K Y
Sbjct: 23  SVSRENQISLAIVLVGSEDRREIKEGIEILEDVVSDTAHSEDSRVCVHYLALAHARLKNY 82

Query: 466 XKALHYVKSFLEIEPXNQQVLALERXINK 552
            K+++ + + L  EP N Q   L R + K
Sbjct: 83  DKSINLLNALLRTEPSNMQATELRRAVEK 111


>Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical
           protein T27A8.1 protein.
          Length = 492

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 19/80 (23%), Positives = 33/80 (41%)
 Frame = +1

Query: 238 SEDLQKFERVFHEQLHQGNVSHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHPEGKR 417
           ++ +    R F    H  +     Q    W LV S+YP + RK I   K + N H     
Sbjct: 65  TDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVT 124

Query: 418 DYLFYLAIGNARIKEYXKAL 477
             +F +++ +  ++ Y   L
Sbjct: 125 GRVFLVSLAHTLLENYNSNL 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,109,727
Number of Sequences: 27780
Number of extensions: 222870
Number of successful extensions: 410
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)