Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H15
         (913 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    SVH+W     +L
Sbjct: 219 WIWLVWLLSQAWISVHIWSPNCDKL 243


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    SVH+W     +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    SVH+W     +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -1

Query: 484 WEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 317
           W   D+     S A +F  +         + AR+   ++WK+ R  H RL Q S L
Sbjct: 102 WTFIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVL 157


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -3

Query: 272 GS*PRTVKPFLTKFAAMNPPMFPRPRKATFLSV 174
           G  P T   FL   A M PP  P P   TF S+
Sbjct: 158 GRAPLTYHQFLAIIACMGPPPQPEP-PVTFNSL 189



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -2

Query: 375 GQYGNDHVDSINGCSNGVGWRHSVLGRCVQCIFGR 271
           GQ G   +D+I       GW H +    V C   R
Sbjct: 346 GQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 380


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 328 WSWLASLRSWPLRSVHLWKDRSREL 254
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,385
Number of Sequences: 336
Number of extensions: 4688
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)