Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H15
(913 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 92 5e-19
01_06_0663 - 30991390-30992340 82 7e-16
05_07_0134 - 27911920-27912762 65 8e-11
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 63 3e-10
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 55 9e-08
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 48 8e-06
06_01_0080 + 644021-645463 37 0.019
06_03_0219 - 18227559-18227858,18227864-18228340 32 0.73
02_01_0384 - 2781362-2782299,2782320-2782428 31 1.3
04_01_0035 - 433848-434372,434905-435381 31 1.7
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.9
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.8
01_06_1113 + 34613668-34614075,34614781-34614970,34615264-346153... 29 6.8
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 9.0
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 92.3 bits (219), Expect = 5e-19
Identities = 66/193 (34%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Frame = +1
Query: 223 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 402
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 403 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 546
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 547 GVMGAQNATLAFMAGGRKEDFERSLPLLQVMGAKQFXCGQIGSGQVAXLTNXMLMGITGN 726
GV A+ L FM GG +E + + PLL MG K CG G+G VA + N M M I+
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 727 GYS*VXEHGHXXG 765
G S G G
Sbjct: 181 GVSEAFALGQNLG 193
>01_06_0663 - 30991390-30992340
Length = 316
Score = 81.8 bits (193), Expect = 7e-16
Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Frame = +1
Query: 157 RAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXX 336
R S +T + VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 13 RPISPDTTR-VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRA 71
Query: 337 XXXXXXXXXSILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEK 513
++ V L G +A G LL+D +T DP + +I A K
Sbjct: 72 AAAAADVIFLMVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAK 131
Query: 514 GLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLQVMGAKQFXCGQIGSGQVAXL 693
DAPVSGG GA++ATL+ AGG R PL ++MG + G G+GQ A L
Sbjct: 132 SCAAVDAPVSGGDRGARSATLSIFAGGDAAVVARLAPLFKLMGNALYMGGP-GAGQRAKL 190
Query: 694 TNXMLMGITGNGYS*VXEHGHXXG 765
N + + T G + H G
Sbjct: 191 GNQIAIASTMVGLVEGMVYAHKAG 214
>05_07_0134 - 27911920-27912762
Length = 280
Score = 64.9 bits (151), Expect = 8e-11
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +1
Query: 223 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 402
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 403 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 579
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 580 FMAGGRKEDFERSLPLLQVMGAKQFXCGQIGSGQVAXLTN 699
+AGG + PL +G + G GSGQ + + N
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLGRPTY-MGPPGSGQSSKIAN 159
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 63.3 bits (147), Expect = 3e-10
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Frame = +1
Query: 127 STQCLYTAARRA----YSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNA 294
++Q +Y A++ A + T K + F+GLG MG MA++L+K GF+V YD K L
Sbjct: 302 ASQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLAR 361
Query: 295 AAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTID 471
G +S I+ +N+V + V G G V+ G+ +I SST+
Sbjct: 362 FTDLGGLTKDS-PEEVSKDVEILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVS 420
Query: 472 PN-VPKQIFPIALE-KGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLQVMGA 645
P V K + E + + DAPVSGGV A TL +K + S+ + +
Sbjct: 421 PGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSE 478
Query: 646 KQFXC-GQIGSGQVAXLTNXMLMGI 717
K + G G+ + N +L G+
Sbjct: 479 KLYVIKGGCGAASSVKMVNQLLAGV 503
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 54.8 bits (126), Expect = 9e-08
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +1
Query: 508 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLQVMGAKQFXCGQIGSGQVA 687
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 688 XLTNXMLMGITGNGYS 735
L M+MG N S
Sbjct: 170 KLVVNMIMGSMMNALS 185
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 187 VAFLGLGNMGGFMAANLVKKGFTV 258
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 379 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 471
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 48.4 bits (110), Expect = 8e-06
Identities = 50/224 (22%), Positives = 81/224 (36%), Gaps = 2/224 (0%)
Frame = +1
Query: 49 LLCARAHGRTLN*EKNKFKMAARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMGGFMA 228
LLCARA AR + S C +++ + V FLGLG MG MA
Sbjct: 9 LLCARAAAAAPTLRLRGGGRGARLVFS--CSASSSSPSGEGGFSGKVGFLGLGIMGAPMA 66
Query: 229 ANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYLG 408
+NL+ G V ++ ++ + G S ++L + ++V G
Sbjct: 67 SNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVACG 126
Query: 409 KDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVSGGVMGAQNATLAF- 582
+G G +D ST+D K I G F + S +G F
Sbjct: 127 ANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFSSCTVGPMLTRYLFS 186
Query: 583 MAGGRKEDFERSLPLLQVMGAKQFXCGQIGSGQVAXLTNXMLMG 714
+ + ++ + + +F G +G G L M+MG
Sbjct: 187 RLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMG 230
>06_01_0080 + 644021-645463
Length = 480
Score = 37.1 bits (82), Expect = 0.019
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 7/149 (4%)
Frame = +1
Query: 187 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXX 363
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 364 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 525
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 526 TDAPVSGGVMGAQNATLAFMAGGRKEDFE 612
VSGG GA+N + M GG E ++
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAYK 153
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 31.9 bits (69), Expect = 0.73
Identities = 25/72 (34%), Positives = 31/72 (43%)
Frame = -3
Query: 722 PVMPINMXLVXLATCPEPICPQXNCLAPITWRRGRDLSKSSLRPPAMKARVAF*APMTPP 543
PV+PI++ V L + P P C A T RR S PP R+A P PP
Sbjct: 58 PVVPIHLP-VALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRRPP 115
Query: 542 DTGASVNPSPFS 507
+ PS FS
Sbjct: 116 ELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = -3
Query: 677 PEPICPQXNCLAPITWRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSKAI 498
P P+ +T R LS ++ PA +R P +PP GAS P S A
Sbjct: 185 PPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRRSSSAA 244
Query: 497 GKICLGTFG 471
C G G
Sbjct: 245 SPSCAGVEG 253
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +1
Query: 148 AARRAY---SSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 318
AAR Y S + K+V +GLG++G +A L G T+ Y+ S+ ++ + N
Sbjct: 149 AARGDYPLGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPD 206
Query: 319 ANSIXXXXXXXXXXXSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 468
+ ++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 207 VTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 223 MAANLVKKGFTVRGYDPSKDALN 291
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 436 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 317
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>01_06_1113 +
34613668-34614075,34614781-34614970,34615264-34615372,
34615822-34615912,34615948-34616076,34616306-34616804,
34617154-34617251
Length = 507
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 640 GAKQFXCGQIGSGQVAXLTNXMLMGITGNGYS*VXEHGHXXG 765
G F G +G G T +MG GNGY+ GH G
Sbjct: 71 GGGAFRPGGVGVGVAGPRTPRPMMGAPGNGYNSGGGSGHGTG 112
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 187 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 315
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,887,372
Number of Sequences: 37544
Number of extensions: 591888
Number of successful extensions: 1667
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -