Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H12
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0002 - 15280292-15281550,15282714-15282840                       34   0.14 

>06_03_0002 - 15280292-15281550,15282714-15282840
          Length = 461

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +2

Query: 275 CPACVTLLGEGATCKIYSKELGETPSAVCKEPLKCIKRVCTKLV*SFSLAGKYKLAILLS 454
           C  C++L+   A C  Y   L   P        +C    C + V  + +AG+++ A++  
Sbjct: 164 CTECLSLVRSAAVCS-YCLSLDNLPPEDSSVTCRC----CNRCVHPYCIAGEHRAALIQP 218

Query: 455 RPVRNIICV 481
             V N ICV
Sbjct: 219 IDVENFICV 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,038
Number of Sequences: 37544
Number of extensions: 330484
Number of successful extensions: 755
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)