Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H11
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB...    30   4.9  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    29   8.5  

>AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB,
           isoform B protein.
          Length = 1412

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +1

Query: 391 FPFNFXTHHGRKLRQAHFQKLQPRSEARFHNQSLETKDLHSAMVQTSRLNSSVGSSLPCG 570
           F  +  T H   +   HFQ+ Q + +A+ H Q  +    H   V  S  +SS  S++  G
Sbjct: 305 FVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQHVIASVSSSSSSSAIGSG 364


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = -1

Query: 715 WRNHCSLVLSAVLPPYTRRSRLLQSVFELIFKYWLYLVLWTLKYTLLFSHKVM----NFQ 548
           W N CS    +   P +  +R  Q+  +   K+++YLV  T    ++F  K+     N  
Sbjct: 65  WTNICSSKPISCPFPTSHVARQPQNS-DFFIKFYIYLVCIT---QIIFFFKIRKYAGNLC 120

Query: 547 LTSSVCLSAPSPNASLSFR 491
             +S+C+ +P PN  LS R
Sbjct: 121 QRASLCVVSPCPNFPLSLR 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,297,291
Number of Sequences: 53049
Number of extensions: 624773
Number of successful extensions: 2027
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)