Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H08
         (906 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0118 - 5484301-5484957                                           30   2.2  
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281     29   5.1  
10_08_0186 - 15582925-15584334                                         28   8.9  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    28   8.9  

>10_02_0118 - 5484301-5484957
          Length = 218

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 176 CXSTNAAATGVVLNAGTVXLRARARSPAKSKTGCRGGAGEANWQ 45
           C ST +AA  +   +     R  A + A ++T   GG+ +A WQ
Sbjct: 114 CASTISAAANLAKRSSAELTRLDADTAASTETSTSGGSRQARWQ 157


>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
          Length = 518

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -2

Query: 170 STNAAATGVVLNAGTVXLRARARSPAKSKTGCRGGAGEANW 48
           ST  +  GV  NAG+    + + S A S TG   GAG +NW
Sbjct: 425 STMPSGIGVASNAGS---SSGSWSNAGSNTGTLSGAGSSNW 462


>10_08_0186 - 15582925-15584334
          Length = 469

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -1

Query: 186 KLLLXFDERSGNRCCFECRYGATESEGKKPRXKQDRXQGRSRRSELAKVXKEGPSRRG 13
           +LL  FD   G    +E R+          R   DR        ELA+  K+ P RRG
Sbjct: 167 ELLRYFDSYGGPELLYELRFLNARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRG 224


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 631 DEKICYNYGIIKENEQFVM 687
           DE +C+ YG ++ENE +++
Sbjct: 459 DEVLCWLYGTVRENEDYIL 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,821,911
Number of Sequences: 37544
Number of extensions: 391647
Number of successful extensions: 957
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)