Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H07
         (898 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    83   9e-15
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    42   0.028
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    37   0.80 
UniRef50_Q7QSB8 Cluster: GLP_105_29224_28523; n=2; Giardia lambl...    35   2.4  
UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    35   3.2  
UniRef50_Q9VA45 Cluster: CG1340-PA; n=3; Drosophila melanogaster...    34   4.3  

>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 83.0 bits (196), Expect = 9e-15
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = +2

Query: 107 MNFTRIIFFLFVVVFATASAKPWNFFKEIERAVARTRDAVI 229
           MNFTRIIFFLFVVVFATAS KPWN FKEIERAVARTRDAVI
Sbjct: 1   MNFTRIIFFLFVVVFATASGKPWNIFKEIERAVARTRDAVI 41


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 41.5 bits (93), Expect = 0.028
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +2

Query: 107 MNFTRIIFFLFVVVFATASAKPWNFFKEIERAVARTRDAVI 229
           M FT+I+F   + +   + A  W+FFKE+E    R RD++I
Sbjct: 1   MYFTKIVFVAIICIMIVSCASAWDFFKELEGVGQRVRDSII 41


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 36.7 bits (81), Expect = 0.80
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
 Frame = +2

Query: 107 MNFTRIIFFLFVVVFATA--SAKP---WNFFKEIERAVARTRDAVI 229
           MNF+RI FF+F  + A A  +A P   W  FK+IE+     RD +I
Sbjct: 1   MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGII 46


>UniRef50_Q7QSB8 Cluster: GLP_105_29224_28523; n=2; Giardia lamblia
           ATCC 50803|Rep: GLP_105_29224_28523 - Giardia lamblia
           ATCC 50803
          Length = 233

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
 Frame = +3

Query: 102 SK*ISRESYFSCSLLFSRPHQRN--LGT----SSRKSSAPWRGREMPSS 230
           +K + RE  F CS LF R  Q N   GT    S+R+S APWR R  PSS
Sbjct: 98  AKRLRREKNF-CSALFPRTRQDNHDQGTIMMRSTRQSRAPWRPRHWPSS 145


>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
 Frame = +2

Query: 107 MNFTRIIFFLFVVVFATA--SAKP---WNFFKEIERAVARTRDAVI 229
           MNF +I+ F+F +V A +  SA P   W  FK+IE+     RD ++
Sbjct: 1   MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIV 46


>UniRef50_Q9VA45 Cluster: CG1340-PA; n=3; Drosophila
           melanogaster|Rep: CG1340-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 459

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
 Frame = -1

Query: 304 GTGVLGLAGRDGGSCAYRRHRRTRADDGISRPRHGALDFLEEVPRFR*CGRENNNEQEKY 125
           G G  G  G   G+  Y + R  R DD +     G+  F    PR      + +N     
Sbjct: 168 GVGRGGSTGAANGNNPYYQRRNYRRDDSV-----GSHQFRRREPRSNSSNHQMSNSSPTQ 222

Query: 124 DSREIHFDFSTKAGFEYRV----RNNKYQ 50
            +  I+++ +T+ GF  RV      N+YQ
Sbjct: 223 STTSINYNRTTRGGFNSRVAVGGNGNRYQ 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,880,110
Number of Sequences: 1657284
Number of extensions: 10624212
Number of successful extensions: 31701
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31651
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)