Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_H04
(894 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 122 3e-28
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 96 3e-20
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 90 3e-18
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 83 4e-16
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 82 7e-16
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 78 8e-15
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 4e-12
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 68 9e-12
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 54 2e-07
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 52 6e-07
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 48 1e-05
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 47 2e-05
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 41 0.001
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.011
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 3.8
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 3.8
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 5.1
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 28 8.9
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 122 bits (295), Expect = 3e-28
Identities = 53/89 (59%), Positives = 70/89 (78%)
Frame = +3
Query: 171 EVPTEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIK 350
E+ E +VLVL++ NF+ ++ +++LVEFYAPWCGHCK+LAPEYAKAA +L E+S IK
Sbjct: 19 EIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIK 78
Query: 351 LAKVDATQEQDLAESYGVRGYPTLKFFXE 437
LAKVDAT E L E + V+GYPT+KFF +
Sbjct: 79 LAKVDATAETKLGEKFQVQGYPTIKFFKD 107
Score = 64.9 bits (151), Expect = 8e-11
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Frame = +3
Query: 171 EVPTEXN---VLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 338
E+P + + V VL NF+ V + + VEFYAPWCGHCK LAP + + K ++
Sbjct: 376 EIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKY-KDH 434
Query: 339 SPIKLAKVDATQEQDLAESYGVRGYPTLKFF 431
+ I +AK+D+T + E V +PT+K+F
Sbjct: 435 ADIVVAKMDSTANE--VEGVKVHSFPTIKYF 463
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 500 RRLAPLXVEVTSAEQAKELIDANTVIVFGFFSDQSSTRAKTFLSTAQVVDDQVFAIVSDE 679
++ P ++ +A+ K+ I +V GFF+D+ S AK FLS A +DD F IVSD+
Sbjct: 128 KKTGPPAKDLATADAMKDFITKEVAVV-GFFTDKESDAAKAFLSAADGIDDVEFGIVSDK 186
Score = 46.0 bits (104), Expect = 4e-05
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 436 NGSPIDYSGGRQADDIISWLKKKTGPP 516
+G P +Y+GGR A +I+SWL KKTGPP
Sbjct: 107 DGKPSEYAGGRTAPEIVSWLNKKTGPP 133
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 799 VFVQSMPTIVEFSHETASKILVGKIKYHLLI 891
V +P + EFS ETA KI G +K+H+L+
Sbjct: 245 VKANQLPLVTEFSDETAPKIFGGDVKHHILL 275
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 113 bits (273), Expect = 1e-25
Identities = 52/93 (55%), Positives = 63/93 (67%)
Frame = +3
Query: 171 EVPTEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIK 350
EV E +V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ + P+
Sbjct: 56 EVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVP 115
Query: 351 LAKVDATQEQDLAESYGVRGYPTLKFFXEWQSY 449
AK+DAT D+A+ + V GYPTLK F + Y
Sbjct: 116 FAKMDATVASDIAQRFDVSGYPTLKIFRKGTPY 148
Score = 105 bits (253), Expect = 4e-23
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +3
Query: 177 PTEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 356
P L L+K NF V++ +LVEF+APWCGHCK LAPEY KAA +L + + PI LA
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLA 232
Query: 357 KVDATQEQDLAESYGVRGYPTLKFF 431
VDAT E +LA+ Y V+GYPTLK F
Sbjct: 233 IVDATIESELAQKYEVQGYPTLKVF 257
Score = 54.8 bits (126), Expect = 9e-08
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +3
Query: 183 EXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKV 362
E +V+ K E V + +L+EFYAPWCG +L P + K +++ I +AK+
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKN-IVIAKI 581
Query: 363 DATQEQDLAESYGVRGYPTLKF 428
DAT D+ +Y V G+PT+ F
Sbjct: 582 DAT-ANDVPSTYAVEGFPTIYF 602
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 439 GSPIDYSGGRQADDIISWLKKKTGP 513
G+P +Y G R+ I+ ++KK++ P
Sbjct: 145 GTPYEYEGPREESGIVEYMKKQSDP 169
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 96.3 bits (229), Expect = 3e-20
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 189 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 368
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAKVD
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDC 598
Query: 369 TQE-QDLAESYGVRGYPTLKFF 431
T+ +D YGV GYPTLK F
Sbjct: 599 TEAGKDTCSKYGVSGYPTLKIF 620
Score = 65.3 bits (152), Expect = 6e-11
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 192 VLVLSKANFETVIST-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 368
V V+ NF+ +++ T+ +L+EFYAPWCGHCKSL P+Y + KL ++ I +AK+DA
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDA 922
Query: 369 TQEQDLAESYGVRG 410
T D ++ V+G
Sbjct: 923 T-ANDAPPNFSVQG 935
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 89.8 bits (213), Expect = 3e-18
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = +3
Query: 180 TEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
T+ V+ L+K NF+ V++ ++ LVEFYAPWCGHCK LAP Y + + + S + +AK
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG-EAYTQSSDVIIAK 78
Query: 360 VDATQEQDLAESYGVRGYPTLKFF 431
VDA ++DL + V+G+PT+K+F
Sbjct: 79 VDADGDRDLGSRFDVKGFPTIKYF 102
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +1
Query: 442 SPIDYSGGRQADDIISWLKKKTG 510
+P +Y+GGR +D I ++++KTG
Sbjct: 108 TPEEYNGGRDINDFIKFIEEKTG 130
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 82.6 bits (195), Expect = 4e-16
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +3
Query: 189 NVLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 365
+V+ L+ NFE V+++ + LVEF+APWCGHC+ LAPE+AKAAT+L + +K+ +D
Sbjct: 80 DVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL---KGKVKVGALD 136
Query: 366 ATQEQDLAESYGVRGYPTLKFF 431
AT A Y V+GYPT+K F
Sbjct: 137 ATVHTVTASRYQVQGYPTIKVF 158
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 81.8 bits (193), Expect = 7e-16
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +3
Query: 180 TEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
T V+ L F+ ++ +LV FYAPWCGHCK++ PEY AA L E+E P LA
Sbjct: 80 TPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAA 139
Query: 360 VDATQEQDLAESYGVRGYPT 419
VDAT+E L + + V GYPT
Sbjct: 140 VDATKEAALGKRFKVEGYPT 159
Score = 54.4 bits (125), Expect = 1e-07
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Frame = +3
Query: 171 EVPTEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAA----------- 317
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAAKHHKDKNKRAL 249
Query: 318 ---------TKLAEEESPIKLAKVDATQEQDLAESYGVRGY 413
L I A VD T+E + + +GV GY
Sbjct: 250 SLRDFDFSNDTLCNRRRLIAYAAVDCTKEMAVCQQFGVEGY 290
Score = 33.1 bits (72), Expect = 0.31
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 246 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 335
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 78.2 bits (184), Expect = 8e-15
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +3
Query: 183 EXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKV 362
+ V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +E++ LA V
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAV 108
Query: 363 DATQEQDLAESYGVRGYPTLKFF 431
D T+ +D+A+ + GYPT+K +
Sbjct: 109 DCTKHKDVAKKVALAGYPTVKLY 131
Score = 76.6 bits (180), Expect = 3e-14
Identities = 32/77 (41%), Positives = 51/77 (66%)
Frame = +3
Query: 201 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 380
L ++F ++ TE++LV FYAPWCGHCK+ P+Y KAA ++ + + AK+D T+
Sbjct: 152 LDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV-FAKLDCTKFG 210
Query: 381 DLAESYGVRGYPTLKFF 431
D+ + V GYPTL+++
Sbjct: 211 DVCDKEEVNGYPTLRYY 227
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 69.3 bits (162), Expect = 4e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +3
Query: 189 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAK
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 68.1 bits (159), Expect = 9e-12
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +3
Query: 183 EXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATK-LAEEESPIKLAK 359
E +L L +NFE + +++LV+FYAPWC HCK +AP+Y A + L + ++LAK
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAK 192
Query: 360 VDATQE----QDLAESYGVRGYPTLKFFXE 437
VD + + + Y V+ PT+ F +
Sbjct: 193 VDCSANNMATKKTCKKYNVKFLPTIYLFHD 222
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +3
Query: 177 PTEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 356
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + ++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFA 107
Query: 357 KV 362
KV
Sbjct: 108 KV 109
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 66.5 bits (155), Expect = 3e-11
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = +3
Query: 201 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 380
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + + AKVD T +
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA-AKGLFQFAKVDCTDPR 83
Query: 381 D--LAESYGVRGYPTLKFF 431
L +++ + GYP++K F
Sbjct: 84 SKVLCDNFKIEGYPSVKLF 102
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 189 NVLVLSKANF-ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 365
NV L +F +V S + V+F+APWC C L PEY KAA + P+ VD
Sbjct: 285 NVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGK--PVGFGTVD 342
Query: 366 ATQEQDLAESYGVRGYPTLKFFXEWQSYR 452
T L Y +R YPT + Q ++
Sbjct: 343 CTVHSQLCHQYNIRSYPTTILYNNSQPHQ 371
Score = 58.8 bits (136), Expect = 5e-09
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +3
Query: 198 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 377
V SK F V+++ + +V+FYAPWCG C AP+Y + A L + ++ AKV+ Q+
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQD 494
Query: 378 QDLAESYGVRGYPTLKFF 431
L + YPT++ +
Sbjct: 495 YGLCSEANIHSYPTVRLY 512
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 55.2 bits (127), Expect = 7e-08
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +3
Query: 183 EXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKL-AK 359
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E + A
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKAL 80
Query: 360 VDATQEQDLAESYGVRGYPTLKFFXEWQSYRLFRWS 467
++ Q GV + TL + Y W+
Sbjct: 81 MNTNSTQTTCLPMGVHYWRTLLAYTIGVHYGRTLWA 116
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +3
Query: 189 NVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
NV+V+ +F +V + + ++++F A WCG CKS+AP + + K + + K
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD----VVFLK 64
Query: 360 VDATQEQDLAESYGVRGYPTLKFF 431
VD Q Q AES G+R PT F+
Sbjct: 65 VDVDQCQLTAESCGIRAMPTFHFY 88
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 52.0 bits (119), Expect = 6e-07
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +3
Query: 189 NVLVL---SKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
NV VL S+ E + T+ ++ +F A WCG CKS+AP Y + L+E+ K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY----SGLSEKYKQAVFLK 63
Query: 360 VDATQEQDLAESYGVRGYPTLKFF 431
+D Q+LA GV PT +FF
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFF 87
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +3
Query: 219 ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 398
+ VI+ + +L+ FY PWCG C + AP A + ++ S + + ++DA Q DL +
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNL 586
Query: 399 GVRGYPTLKFF 431
V YP++ F
Sbjct: 587 TVSSYPSIILF 597
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/80 (22%), Positives = 43/80 (53%)
Frame = +3
Query: 192 VLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDAT 371
++ + N + + ++++ + FYAPW HC+ + + + A + A+ + I + K +A
Sbjct: 28 IVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDD-IVVGKSNAY 86
Query: 372 QEQDLAESYGVRGYPTLKFF 431
++ +A Y + YP ++F
Sbjct: 87 EDVKIATRYWIDRYPMFRYF 106
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 45.2 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +3
Query: 207 KANFETVISTTE--YILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 374
+A F +VI+ T+ ++++FYA WCG C+ + P++ K A EE + AK+D +
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +3
Query: 180 TEXNVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 359
+E V +L+K F+ I + V+FYAPWC HC LAP + + A ++ + I ++K
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISK 145
Query: 360 VD 365
++
Sbjct: 146 IN 147
Score = 35.5 bits (78), Expect = 0.058
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +3
Query: 291 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFXE 437
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYD 49
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 264 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTL 422
A WC CK L P + +AE++ + LAKVD +LA ++GV PT+
Sbjct: 46 ACWCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTV 95
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 270 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTL 422
WC CK L P + +AE++ + LAKVD +LA ++GV PT+
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTV 49
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.011
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 216 FETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 365
F+ + E ++F A WCG C+ + P++ ++A+E +K AKVD
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 189 NVLVLSKANFETVISTTEYILVEFYA 266
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 252 VEFYAPWCGHCKSLAPEYAKAATKL 326
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 213 NFETVISTTEYIL--VEFYAPWCGHCKSL 293
+F+ ++S++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 270 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 383
WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +3
Query: 252 VEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 398
+ F A WC C++ PE + + + ++ V + + QD + Y
Sbjct: 178 IYFSAHWCPPCRAFTPELVSTYDAVRKANNAFEVIFVSSDRSQDSFKDY 226
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,656,862
Number of Sequences: 59808
Number of extensions: 388571
Number of successful extensions: 1074
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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