Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_H04
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.71 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   0.71 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   6.6  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 297 VPEICSGRTMEHRIQLKCTPWLKLQFQS 214
           +P++CSG    + I L   P L+L F++
Sbjct: 238 IPQVCSGNCKLNDILLTVRPHLELTFEN 265


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 297 VPEICSGRTMEHRIQLKCTPWLKLQFQS 214
           +P++CSG    + I L   P L+L F++
Sbjct: 238 IPQVCSGNCKLNDILLTVRPHLELTFEN 265


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 550 RTYRCQYCYCIWFLFG 597
           R  +C Y YC+W  FG
Sbjct: 67  RQLKC-YMYCLWEQFG 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,559
Number of Sequences: 438
Number of extensions: 3320
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)