Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_G22
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 238 1e-61
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 237 2e-61
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 232 1e-59
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 164 3e-39
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 156 8e-37
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 155 1e-36
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 138 2e-31
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 135 1e-30
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 131 2e-29
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 126 8e-28
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 121 3e-26
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 87 7e-19
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 91 5e-17
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 89 1e-16
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 64 7e-12
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 63 8e-09
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 54 4e-06
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 44 0.004
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 43 0.009
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 42 0.016
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 40 0.086
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 39 0.15
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 38 0.46
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 37 0.60
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 36 1.4
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 36 1.8
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 35 3.2
UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcin... 35 3.2
UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate... 33 7.4
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_A5IFG5 Cluster: Transposase; n=1; Legionella pneumophil... 33 9.8
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 33 9.8
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 238 bits (583), Expect = 1e-61
Identities = 117/174 (67%), Positives = 136/174 (78%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPMKQG++TN RVRLL+SK HSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG
Sbjct: 59 QGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGE 118
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP KEGK K + KAP
Sbjct: 119 QDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK---KAKSKAP 175
Query: 359 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 198
KIQRLVTPVVLQ K A+YAKLLA+R KE+K +R E++
Sbjct: 176 KIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKRAKEAKEKRHEQL 229
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/59 (44%), Positives = 29/59 (49%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P GCQ L E F EV + LGDEWKGYV R+ GGNDK P + G
Sbjct: 8 PVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQGFPMKQG 66
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 237 bits (581), Expect = 2e-61
Identities = 125/174 (71%), Positives = 138/174 (79%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPMKQGVLT+ RVRLL+SK HSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG
Sbjct: 59 QGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 118
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAP
Sbjct: 119 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAP 174
Query: 359 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 198
KIQRLVTP VLQ K AEYAKLLA+R KE+K +RQE+I
Sbjct: 175 KIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQI 228
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P GCQ L E F + EV AD LG+EWKGYV+R++GGNDK P + G
Sbjct: 8 PATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQG 66
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 232 bits (567), Expect = 1e-59
Identities = 114/174 (65%), Positives = 135/174 (77%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPMKQGVLTN+RVRLL+ K HSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG
Sbjct: 59 QGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGE 118
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP K+GK KPR KAP
Sbjct: 119 KDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK---KPRTKAP 175
Query: 359 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEEI 198
KIQRL+TPVVLQ K +EAEY K+L R+++ ++RR+ +
Sbjct: 176 KIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRL 229
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/59 (47%), Positives = 32/59 (54%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P G Q FE F GAE+ AD LGDEWKGYV ++AGGNDK P + G
Sbjct: 8 PATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQG 66
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 164 bits (398), Expect = 3e-39
Identities = 89/173 (51%), Positives = 108/173 (62%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPM QGVLTN+RVRLL K CYRPR+ GE++RKSVRGCIV +LS L L +V+KG
Sbjct: 100 QGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGT 159
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R + +N K R P
Sbjct: 160 NEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKNGKNRFIKP 214
Query: 359 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVRRQEE 201
KIQRLVT L K EY K+L + + E + E+
Sbjct: 215 KIQRLVTEKRLLRKRTLIAKKEKRRLEKKKVIKEYKKVLNKYRNELLTKTDED 267
Score = 41.1 bits (92), Expect = 0.037
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIP 709
P N Q E + F + G V D +G+E+ GYV R+ GGNDK P
Sbjct: 49 PLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFP 103
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 156 bits (378), Expect = 8e-37
Identities = 78/130 (60%), Positives = 96/130 (73%), Gaps = 3/130 (2%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPM+QGVL RVR+LM K H YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA
Sbjct: 59 QGFPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGA 118
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKENAKPRH 369
EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R K+GK+ R
Sbjct: 119 NEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKK----RQ 174
Query: 368 KAPKIQRLVT 339
KAPKIQRLVT
Sbjct: 175 KAPKIQRLVT 184
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/59 (42%), Positives = 29/59 (49%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P G Q E F G VEAD LG+E+KGYVL++ GGNDK P G
Sbjct: 8 PLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPMRQG 66
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 155 bits (376), Expect = 1e-36
Identities = 81/167 (48%), Positives = 107/167 (64%), Gaps = 3/167 (1%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 537
GFPMKQGV+ RVRLL+S+ HSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG
Sbjct: 60 GFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVA 119
Query: 536 EIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKENAKPRHK 366
EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R +GK+ R K
Sbjct: 120 EIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKD----RTK 175
Query: 365 APKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKE 225
PKIQRL+TP + +++ EY K L++ KK+
Sbjct: 176 CPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEEYEKFLSEWKKQ 222
Score = 53.2 bits (122), Expect = 9e-06
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P G Q E F G EVE D LGDE+KGYV ++AGGNDK P + G
Sbjct: 8 PLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPMKQG 66
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 138 bits (334), Expect = 2e-31
Identities = 74/124 (59%), Positives = 88/124 (70%), Gaps = 2/124 (1%)
Frame = -2
Query: 704 KQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 525
KQGVL RVR+LM K H YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI G
Sbjct: 69 KQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAG 128
Query: 524 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKEN-AKPRHKAPKIQ 351
LTD NVPRRLGPKR +K+R+LF K D RV+ ++E G + K R KAPKIQ
Sbjct: 129 LTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQRYGKKRQKAPKIQ 180
Query: 350 RLVT 339
RLVT
Sbjct: 181 RLVT 184
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 135 bits (327), Expect = 1e-30
Identities = 76/170 (44%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKG 543
GFPM GVL +SRV LL+ + + R GER+RK+VRGC++ ++++++ + I + G
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVG 120
Query: 542 AQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKA 363
Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+R + K GK K R KA
Sbjct: 121 DQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK---KDRLKA 176
Query: 362 PKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVR 213
PKIQRL+TP V + EY +L+A ++ + R
Sbjct: 177 PKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRRALRQR 226
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 798 GAEVEADQLGDEWKGYVLRVAGGNDKXRIP 709
G EV+ G E+KGY+ R+ GG+DK P
Sbjct: 34 GNEVDGAIFGSEFKGYIFRLRGGSDKDGFP 63
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 131 bits (317), Expect = 2e-29
Identities = 73/166 (43%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPMKQGV+T R+RLL+ SCYRPR+DGERKRK+VRGCI+ +S L V+++KG
Sbjct: 59 QGFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGE 118
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLPAKEGKENAKPRHKA 363
+EI GLT VPRR GPKRAS +R +F ++ + D + V+KR K GK +
Sbjct: 119 KEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPGK------FTS 170
Query: 362 PKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKE 225
PK+QRL+T + K +Y LL Q++K+
Sbjct: 171 PKVQRLITARRVARKNRMLKERKEKREATKKKAEQYQALLKQQQKQ 216
Score = 41.5 bits (93), Expect = 0.028
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P NG Q + + + + G ++E ++LG ++KGY+ R+ GG DK P + G
Sbjct: 8 PENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMKQG 66
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 126 bits (304), Expect = 8e-28
Identities = 56/101 (55%), Positives = 79/101 (78%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 537
GFPM GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG
Sbjct: 59 GFPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEG 118
Query: 536 EIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 414
EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 119 EIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
Score = 46.4 bits (105), Expect = 0.001
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P G F+ ++ F G EV+A LGDE+KGY+L++ GG DK P TG
Sbjct: 7 PATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTG 65
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 121 bits (291), Expect = 3e-26
Identities = 72/174 (41%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPM QGVL + R RLL+ + CY RR+GERKRKS+RGCIV +L L++V+V G
Sbjct: 65 QGFPMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGD 124
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV---LPAKEGKENAKP 375
+ +PGLTD VP+RL PKRASKIR+LF L +K D + +V + L + +N +
Sbjct: 125 KTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELGHEVTLKNGEK 184
Query: 374 RHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKVR 213
+ K PK+QR+VT EY LL++ K+ +R
Sbjct: 185 KLKYPKVQRVVTDEKYARKQRVIAEKKEIMRKSLQQLEEYKALLSRMGKQHNIR 238
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 87.4 bits (207), Expect(2) = 7e-19
Identities = 54/121 (44%), Positives = 71/121 (58%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 59 QGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNP 117
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
P RLGP R+S I K++ L +EDD V+P K + + K R A
Sbjct: 118 S----------PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNAT 160
Query: 359 K 357
K
Sbjct: 161 K 161
Score = 64.9 bits (151), Expect = 3e-09
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
P GCQ LFE F + G VEAD LGDEWKGY LR+AGGNDK P + G
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQG 66
Score = 29.9 bits (64), Expect(2) = 7e-19
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 263 AEYAKLLAQRKKESKVRR 210
AEY KLL +RKKESK R
Sbjct: 165 AEYVKLLVKRKKESKANR 182
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 90.6 bits (215), Expect = 5e-17
Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Frame = -2
Query: 746 FVSLAATTXQGFPMKQGVLTNSRVRLLMSKXHSCYR--PRRDGERKRKSVRGCIVDANLS 573
F+ QGFPMK+G+L+ SRV++L+ K + R + GER RKSVRGCIV +S
Sbjct: 50 FIITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEIS 109
Query: 572 VLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEG 393
VL + ++ ++ +T+ N + L KR+S +RK+ L+K DD+R++ +K AK+
Sbjct: 110 VLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK---IAKDF 165
Query: 392 KENAKPRHKAPKIQRLVTPVVLQ 324
K KIQRL+TP+ +Q
Sbjct: 166 KNKV-------KIQRLITPIKIQ 181
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 89.4 bits (212), Expect = 1e-16
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
QGFPM G LT RVR L+SK + YR RR G R+RKSVRG IV + VL L+I+R G
Sbjct: 44 QGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGE 103
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--EGKENAKPRHK 366
+EI GLT+ P++ K+RK+F + E+ ++ +L ++ + K+ K RH
Sbjct: 104 KEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHN 163
Query: 365 APKIQR 348
+++R
Sbjct: 164 GKRMKR 169
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 63.7 bits (148), Expect(2) = 7e-12
Identities = 43/108 (39%), Positives = 59/108 (54%)
Frame = -2
Query: 680 RVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 501
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 500 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 357
RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.9 bits (64), Expect(2) = 7e-12
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 263 AEYAKLLAQRKKESKVRR 210
AEY KLL +RKKESK R
Sbjct: 112 AEYVKLLVKRKKESKANR 129
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 63.3 bits (147), Expect = 8e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = -2
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 378
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 377 PRHKAPKIQRL 345
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
Score = 56.8 bits (131), Expect = 7e-07
Identities = 25/55 (45%), Positives = 32/55 (58%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIP 709
P GCQ L E F + +EV AD LG+EWKGY++R++GGNDK P
Sbjct: 8 PATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFP 62
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 54.4 bits (125), Expect = 4e-06
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = -2
Query: 713 FPMKQGVLTNSRVRLLMSKXHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 537
F MKQ VL + RV LL++ HS Y+P R E S++ V +S+L +VI+ G +
Sbjct: 50 FSMKQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRK 108
Query: 536 EIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--EGKENAKPRHKA 363
+IPG T +R PKR +I+ F++S +K VL K + K++ KPR K
Sbjct: 109 DIPGQT-----KRWAPKRWRRIQS-FSVS---------LKTVLSTKKPQNKDSKKPRPKT 153
Query: 362 PKIQ 351
K+Q
Sbjct: 154 HKVQ 157
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = -2
Query: 728 TTXQGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 549
T GFPM+ + +R RLL+S +RP+ G RKRK VRG ++ ++ + V+V+
Sbjct: 56 TDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVK 114
Query: 548 KG 543
G
Sbjct: 115 HG 116
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = -2
Query: 728 TTXQGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 552
T GFPM+ V RV++L+S+ +RPR GER++K+V G + N+ + + IV
Sbjct: 67 TDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -2
Query: 728 TTXQGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRG 597
T GFPM+ + RVR+L+SK +RP+ GER++K+VRG
Sbjct: 67 TDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 549
GFPM+ V+ ++ ++L+S Y P +GER+RK++RG + + + +IVR
Sbjct: 160 GFPMRFDVIGAAKRKILLSGPPGFY-PNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 39.1 bits (87), Expect = 0.15
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = -2
Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
+G K+GV S ++ L + S + E + + +R + V+ LV +R G
Sbjct: 172 KGVRFKEGVFRVSGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFGP 231
Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKP-RHKA 363
+ L G RRL K+R+L N D+R ++GK+NA P + +A
Sbjct: 232 LNLGKLKTGE-SRRLSDTELKKLRQLLNEKHSPDIRH---------RKGKKNAAPAKTRA 281
Query: 362 PK 357
P+
Sbjct: 282 PR 283
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 37.5 bits (83), Expect = 0.46
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = -2
Query: 728 TTXQGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIV 588
T G PM GV + R ++L++ + PR GER+RKSVRG ++
Sbjct: 164 TDATGIPMHPGVPGSGRYKVLLAGPPG-FHPRERGERRRKSVRGRMI 209
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 37.1 bits (82), Expect = 0.60
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 537
GFPMK+ V R + L++ ++P + G R+RK+VRG + ++S + + + +G Q
Sbjct: 57 GFPMKEDVDGTRRFKSLVNGGTG-FKPTKKGLRRRKTVRGNTIADDISQINVKVSERGEQ 115
Query: 536 EI 531
+
Sbjct: 116 TL 117
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 552
GFPM + + R+L+S + PR GER+RK+VRG + ++ + VIV
Sbjct: 159 GFPMLPSIPGPVKKRVLLSGPPG-FHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWK 757
P GCQ L E F + EV AD LG+EWK
Sbjct: 8 PATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 546
GFPM+ + + R L+S + PR GER+RK+VRG + ++ + IV++
Sbjct: 181 GFPMRPDIPGPVKKRALLSGPPGFW-PREKGERRRKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_Q8TRJ6 Cluster: Glycosyltransferase; n=1; Methanosarcina
acetivorans|Rep: Glycosyltransferase - Methanosarcina
acetivorans
Length = 812
Score = 34.7 bits (76), Expect = 3.2
Identities = 19/101 (18%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -2
Query: 710 PMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIV-DANLSVLALVIVRKGAQE 534
P K+ ++T++R ++L+ +SCY PR G+ + ++ + + ++++ +++ K Q
Sbjct: 405 PAKKNIITSNREKILVLATYSCYPPRGGGQHRLYNIYSLLAKEFDVTICSIIEANKQYQN 464
Query: 533 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 411
+ + D + + P+ R + K+ Y V +
Sbjct: 465 L--VLDNGLKQICIPQSTEHARYQWEAEKKVGANLYDVAMI 503
>UniRef50_UPI0000DAF6F6 Cluster: glucosamine fructose-6-phosphate
aminotransferase (isomerizing); n=1; Campylobacter
concisus 13826|Rep: glucosamine fructose-6-phosphate
aminotransferase (isomerizing) - Campylobacter concisus
13826
Length = 610
Score = 33.5 bits (73), Expect = 7.4
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 121 NTVDHFCGALWLELLESRIEADRLRLISSWRRTLDSFFLCASNLAYSASED 273
NT+ CGA+WL L + +A L + +T D LC N S D
Sbjct: 168 NTLKKVCGAIWLSLANNAAKASELESVEEILKTNDLKALCFINQKDKLSRD 218
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 7.4
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -2
Query: 563 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 423
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_A5IFG5 Cluster: Transposase; n=1; Legionella pneumophila
str. Corby|Rep: Transposase - Legionella pneumophila
(strain Corby)
Length = 328
Score = 33.1 bits (72), Expect = 9.8
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 520 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSR-RGL*HEWXFDIRRRTRLFVR- 693
VN G W+P + R K ++L+ + P T R++ S + L H F RR +LF R
Sbjct: 88 VNKG--WSPEQISGRMKYQKLSFYVCPETIYRYVYQSNDKALYHSLAFKKPRRQKLFRRK 145
Query: 694 -TPCFIGNPXLV 726
C G P L+
Sbjct: 146 HRTCRYGTPYLI 157
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 33.1 bits (72), Expect = 9.8
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -2
Query: 716 GFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQ 537
GF M+ + ++R+L+ + Y + G R+RKS+RG + +++++ +V G+
Sbjct: 56 GFAMRHDIHGAMKMRVLLKEGPG-YNVKEKGLRRRKSLRGNTISKDITLINTKVVEYGSA 114
Query: 536 EIPG 525
+ G
Sbjct: 115 PLGG 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,115,862
Number of Sequences: 1657284
Number of extensions: 14120272
Number of successful extensions: 37674
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37640
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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