Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G22
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   177   7e-45
AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical ...    29   5.9  
Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical p...    28   7.8  
Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical p...    28   7.8  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  177 bits (432), Expect = 7e-45
 Identities = 93/165 (56%), Positives = 111/165 (67%)
 Frame = -2

Query: 719 QGFPMKQGVLTNSRVRLLMSKXHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGA 540
           QGFPMKQG+LTN RVRLL+ K  SCYR R++GERKRKSVRGCIVDAN+S L+LVIV+KG 
Sbjct: 59  QGFPMKQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGD 118

Query: 539 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAP 360
            EI GLTD  +PR+LGPKRASKIRKLFNL+K DDV +YV+       +G      +  AP
Sbjct: 119 GEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDG----VTKTIAP 174

Query: 359 KIQRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKE 225
           KIQRL+TP  +                 +   A Y KLLA+  KE
Sbjct: 175 KIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKE 219



 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 26/59 (44%), Positives = 30/59 (50%)
 Frame = -1

Query: 873 PGNGCQXLFEXGXXTSFVFFTKSAWGAEVEADQLGDEWKGYVLRVAGGNDKXRIPDETG 697
           P  G Q  FE         F +     EV  D LGDEWKGYV+R+ GGNDK   P + G
Sbjct: 8   PATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQGFPMKQG 66


>AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical
           protein Y57A10C.3 protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 189 PAFDLFLATHLGFLLSLCKQFSIFSLRGLALSETLLLQSETMTSTL 326
           P F ++    +G L+++C Q SIFS+  L + +  +L ++     L
Sbjct: 70  PFFGIWFELIIGKLITMCYQLSIFSIGNLEIRKFYVLWTDDSNKML 115


>Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
 Frame = +3

Query: 201 LFLATHLGFLLSLCKQFSIFSLR-GLALSETLLL-----QSETMTSTLQNYRGD*PLDLR 362
           L+L + LGF+   C     + LR   A +E L         ET ++   NY     +D +
Sbjct: 428 LWLRSLLGFIFFYCCFVCAYMLRPSSATTEHLTRGRINDDGETESTNSTNYLQWHAIDTQ 487

Query: 363 CLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFG 479
           C +  +S +  + GW     +I T I+   ++  L DFG
Sbjct: 488 CHLMYYSAWPWYHGWFRLGCEIMTIIVMLFQI--LLDFG 524


>Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
 Frame = +3

Query: 201 LFLATHLGFLLSLCKQFSIFSLR-GLALSETLLL-----QSETMTSTLQNYRGD*PLDLR 362
           L+L + LGF+   C     + LR   A +E L         ET ++   NY     +D +
Sbjct: 428 LWLRSLLGFIFFYCCFVCAYMLRPSSATTEHLTRGRINDDGETESTNSTNYLQWHAIDTQ 487

Query: 363 CLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFG 479
           C +  +S +  + GW     +I T I+   ++  L DFG
Sbjct: 488 CHLMYYSAWPWYHGWFRLGCEIMTIIVMLFQI--LLDFG 524


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,900,544
Number of Sequences: 27780
Number of extensions: 328876
Number of successful extensions: 868
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)