Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_G16
(909 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 158 2e-37
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 75 3e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 8e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 64 4e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 4e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 43 0.012
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.088
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.47
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 37 0.62
UniRef50_Q53D46 Cluster: JM24; n=4; Cercopithecine herpesvirus 1... 35 2.5
UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a ... 34 4.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 34 4.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 158 bits (384), Expect = 2e-37
Identities = 79/101 (78%), Positives = 79/101 (78%)
Frame = +2
Query: 563 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 742
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 743 AVXISVRCXSFASXLGCVXXXXXXXXXXXXXXVTIVLSPXR 865
AV ISVRC SFA V VTIVLSP R
Sbjct: 84 AVGISVRCRSFAPS-WAVCTNPPFSPTAAPYPVTIVLSPTR 123
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 74.9 bits (176), Expect = 3e-12
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 658 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSSV 765
RSPVPTLPLTGYLSAFLPSGSVALSHSSRC YLSSV
Sbjct: 2 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2
Query: 563 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 676
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Frame = +2
Query: 563 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 688
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 327 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 425
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 64.5 bits (150), Expect = 4e-09
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3
Query: 871 VLPGWTQDDSYRIRAQRSG*XGGVRHTAQXGXERXTPN*DTYSVSYEKAPRFPKGER 701
V PGWTQDDSYR + + S GVR + ER P+ DT SVSYEKAPRFPKG++
Sbjct: 6 VRPGWTQDDSYR-KGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKK 61
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = -1
Query: 708 EKGGQVSGKRQGRNRRAXEGASRGKRLVSL*SCRVSPPLT 589
+K QVSGKRQGRNRRA EGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/57 (64%), Positives = 38/57 (66%)
Frame = -2
Query: 560 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIXLILWITVLPPLSELIPLAAAERP 390
RGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 303 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 461
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 44.4 bits (100), Expect = 0.004
Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -3
Query: 886 VGIRXVLPGWTQDDSYRIRAQRSG-*XGGVRHTAQXGXERXTPN 758
+ +R LPGWTQDDSYRIR RSG GVR + ER TPN
Sbjct: 1 MALRRALPGWTQDDSYRIR--RSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 229 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 351
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 42.7 bits (96), Expect = 0.012
Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 618 IKIPGVSPWKLPXALSCSDPAAYRIPVRLSPFGKRGAFS*LTLXVSQFGV---XRS-XPX 785
+KI VS LP ALSCS+PA RIPV PF G+ + S G+ RS P
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGISARCRSFAPS 87
Query: 786 WAVCRTPPXXP 818
WAV + PP P
Sbjct: 88 WAVSKNPPFSP 98
Score = 33.9 bits (74), Expect = 5.8
Identities = 30/92 (32%), Positives = 33/92 (35%)
Frame = +2
Query: 590 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVXISVRCX 769
VR GETRQD K P P PPFSL + + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 770 SFASXLGCVXXXXXXXXXXXXXXVTIVLSPXR 865
SFA V VT+ LSP R
Sbjct: 83 SFAPS-WAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 527 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 676
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.088
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 373 ERGSGRAPNTQTASPRALADSLMQ 302
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.47
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 114 MIRYIDEFGQTTTRMQ 161
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 37.1 bits (82), Expect = 0.62
Identities = 20/35 (57%), Positives = 20/35 (57%)
Frame = +1
Query: 799 EPPRFXPTAAPLSGNYRLESXPVXPTLSPLXXXXG 903
EPP P LSGNYRLES PV LSPL G
Sbjct: 3 EPP-VQPDRCALSGNYRLESNPVRHDLSPLAAATG 36
>UniRef50_Q53D46 Cluster: JM24; n=4; Cercopithecine herpesvirus
17|Rep: JM24 - Macaca fuscata rhadinovirus
Length = 120
Score = 35.1 bits (77), Expect = 2.5
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 631 AFPPGSSLXRSPVPTLPLTGYLSAFLPSGSVALSH--SSRCXYLSSVXVVRXQXGLCAEP 804
AFP GS P P + GY++ PSG+VAL + SS+C + + LCA P
Sbjct: 20 AFPMGSM--SGPAPEVCCLGYINKLPPSGAVALYYYTSSQCTLDAVILETHRGQKLCANP 77
>UniRef50_Q2SKV3 Cluster: Transcriptional regulator containing a
DNA-binding HTH domain and an aminotransferase domain
(MocR family) and their eukaryotic orthologs; n=1;
Hahella chejuensis KCTC 2396|Rep: Transcriptional
regulator containing a DNA-binding HTH domain and an
aminotransferase domain (MocR family) and their
eukaryotic orthologs - Hahella chejuensis (strain KCTC
2396)
Length = 498
Score = 34.3 bits (75), Expect = 4.4
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 735 MRKRHASRREKGGQVSGKRQGRNRRAXEGASRGKRLVSL*SCRVSPPLT*ASIFVMLVQG 556
MRKR+A R++ R+G EG + G LV S PL+ S F+ VQ
Sbjct: 395 MRKRYAMRQQTLATALQPREGDVEILVEGDNAGLHLV---CWMPSLPLSAVSTFIEQVQT 451
Query: 555 GGAYGKTPATRPFY-GSWPFAGLLL 484
G + PFY G P AGLLL
Sbjct: 452 QGV--RVYPIHPFYHGEPPAAGLLL 474
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.3 bits (75), Expect = 4.4
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 735 MRKRHASRREKGGQVSGKRQGRNRRAXEGASRGKR 631
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 263 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 99
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,610,484
Number of Sequences: 1657284
Number of extensions: 14783999
Number of successful extensions: 40203
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 38317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40169
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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