Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G15
         (1122 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41479 Cluster: Uncharacterized 24.1 kDa protein in LEF...    35   4.4  
UniRef50_A4S1Y9 Cluster: Predicted protein; n=1; Ostreococcus lu...    34   5.8  

>UniRef50_P41479 Cluster: Uncharacterized 24.1 kDa protein in LEF4-P33
            intergenic region; n=4; Nucleopolyhedrovirus|Rep:
            Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic
            region - Autographa californica nuclear polyhedrosis
            virus (AcMNPV)
          Length = 224

 Score = 34.7 bits (76), Expect = 4.4
 Identities = 20/80 (25%), Positives = 25/80 (31%)
 Frame = +1

Query: 835  PXTXVPSXXPSXLXXXXTYXPXRXPLXSLPXXXPXXVPSPPXXXXXTXTXALPXXXXHDP 1014
            P    P+  P+ +    T  P   P+   P   P   P PP          +P      P
Sbjct: 60   PSPPSPTPPPTPIPPTPTPTPPPTPIPPTPTPTPPPSPIPPTPTPSPPPSPIPPTPTPSP 119

Query: 1015 XPSXXPTXXXPXPXHQFPPL 1074
             PS  P    P P     PL
Sbjct: 120  PPSPIPPTPTPSPPPSPSPL 139



 Score = 34.3 bits (75), Expect = 5.8
 Identities = 18/75 (24%), Positives = 24/75 (32%)
 Frame = +1

Query: 829  SXPXTXVPSXXPSXLXXXXTYXPXRXPLXSLPXXXPXXVPSPPXXXXXTXTXALPXXXXH 1008
            S P   +P+  P+      +  P   P+   P   P   P PP          +P     
Sbjct: 45   SPPIVPLPTPPPTPTPSPPSPTPPPTPIPPTPTPTPPPTPIPPTPTPTPPPSPIPPTPTP 104

Query: 1009 DPXPSXXPTXXXPXP 1053
             P PS  P    P P
Sbjct: 105  SPPPSPIPPTPTPSP 119


>UniRef50_A4S1Y9 Cluster: Predicted protein; n=1; Ostreococcus
            lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus
            lucimarinus CCE9901
          Length = 1065

 Score = 34.3 bits (75), Expect = 5.8
 Identities = 26/94 (27%), Positives = 31/94 (32%)
 Frame = +1

Query: 799  PXSXXAXXARSXPXTXVPSXXPSXLXXXXTYXPXRXPLXSLPXXXPXXVPSPPXXXXXTX 978
            P S       S P +  PS  PS      +  P   P    P   P   PSPP     + 
Sbjct: 494  PPSPPPSPPPSPPPSPPPSPPPSPPPSPPSPPPSPPPSPP-PSPPPSPPPSPPPSPPPSP 552

Query: 979  TXALPXXXXHDPXPSXXPTXXXPXPXHQFPPLXS 1080
              + P      P PS  P+   P     F PL S
Sbjct: 553  PPSPPPSPPPSPPPSPPPSPPPPPHFAPFVPLAS 586


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,142,440
Number of Sequences: 1657284
Number of extensions: 2263817
Number of successful extensions: 4117
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 110186985653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)