Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G15
         (1122 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.3  
04_03_0904 + 20717005-20718087                                         29   8.9  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
 Frame = +1

Query: 835  PXTXVPSXXPSXLXXXXTYXPXRXPLXSLPXXX-PXXVPSPPXXXXXTXTXALPXXXXHD 1011
            P +  P   P  L       P   P   LP    P   P PP          LP      
Sbjct: 252  PPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFP 311

Query: 1012 PXPSXXPTXXXPXPXHQFPP 1071
            P PS  P+   P P    PP
Sbjct: 312  PLPSFYPSPPPPPPPPPPPP 331


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 24/91 (26%), Positives = 28/91 (30%)
 Frame = +1

Query: 799  PXSXXAXXARSXPXTXVPSXXPSXLXXXXTYXPXRXPLXSLPXXXPXXVPSPPXXXXXTX 978
            P S       + P T  P   P+      TY P   P    P   P   P+       T 
Sbjct: 215  PPSYKPQPKPNPPPTYKPQPKPNP---PPTYKPA--PPTYKPQPKPNPPPTYKPQPKPTP 269

Query: 979  TXALPXXXXHDPXPSXXPTXXXPXPXHQFPP 1071
            T   P      P P+  PT   P P    PP
Sbjct: 270  TPYTPPTYKPQPKPTPTPTPYTPTPKPNPPP 300


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,352,692
Number of Sequences: 37544
Number of extensions: 86554
Number of successful extensions: 205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3386386840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)