Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G14
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.64 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.84 

>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 435 VRRAKFVR*NTCSKFLTSYFIVLRSSQMFGTSAFNC 328
           ++R K        KFL S  I L+ +Q+FG   F C
Sbjct: 14  LQRIKMEEKLVVEKFLNSLQIYLQHNQIFGFVTFTC 49


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.84
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 396 KFLTSYFIVLRSSQMFGTSAFNC 328
           KFL S  I L+ +Q+FG   F C
Sbjct: 9   KFLNSLQIYLQHNQIFGFVTFTC 31



 Score = 25.0 bits (52), Expect = 0.84
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 399  SKFLTSYFIVLRSSQMFGTSAFNCFN 322
            SKF +S  ++L   Q+FG   F C N
Sbjct: 1088 SKFTSSIRMLLIQGQIFGLITFGCSN 1113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,640
Number of Sequences: 336
Number of extensions: 3886
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)