Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G14
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    27   0.32 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.42 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.42 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    24   2.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   9.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   9.1  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   9.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   9.1  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 260  FEGD*YPQCLGECWHYLL 207
            F+G  YP  LG CWH ++
Sbjct: 1454 FDGKDYPLRLGPCWHAVM 1471


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 48  LEYFLLAGNWFLTINEKLKKILTN 119
           L+YF    NW L +N  L KI  N
Sbjct: 537 LKYFYEIDNWMLDLNSGLNKITRN 560


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 48  LEYFLLAGNWFLTINEKLKKILTN 119
           L+YF    NW L +N  L KI  N
Sbjct: 537 LKYFYEIDNWMLDLNSGLNKITRN 560


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 209 VSNANILQGTVDINRLQTILKDNLKSKDVGTLYYAVRGLKQLKADVPNIC 358
           +SN N L    + N       +N  +      YY +  ++Q+   VP  C
Sbjct: 82  ISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYC 131


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 488 LDKKDVTIQELYLAVYTLXALGKGTIYDXEDALKNLIQLLKKDDTP 625
           +D+  V   ELY    T   +     Y+ ++A+   +QLLK    P
Sbjct: 45  VDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLP 90


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +2

Query: 488 LDKKDVTIQELYLAVYTLXALGKGTIYDXEDALKNLIQLLKKDDTP 625
           +D+  V   ELY    T   +     Y+ ++A+   +QLLK    P
Sbjct: 45  VDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFMQLLKHGMLP 90


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 323 LKQLKADVPNICEDLKTIKYDVKNLEQVFYLTNLALL 433
           L  L+ D+ N  + LK I++  KNL  +  L N A +
Sbjct: 58  LVPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATI 94


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -2

Query: 427 GQVCEV-KHLL*V-LDIILYRFEVLTNVWHISFQLFQSSNSIIQGA 296
           GQ+ EV +H     L I L R E+L +  H++F+L   + +  Q +
Sbjct: 146 GQIREVARHFYHKELQIELVREEILFDTVHVTFKLTFDNRAFTQAS 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,443
Number of Sequences: 438
Number of extensions: 5441
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)