Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G13
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434     34   0.18 
04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016     29   3.8  
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115...    29   3.8  
05_07_0359 - 29539294-29540832,29542366-29542518                       29   5.0  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   5.0  
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769...    28   8.7  

>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
          Length = 418

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -1

Query: 389 GMRVPVRLSPCPFTLSRAXPAEAALSLWRSLKSADPMAL 273
           G   P R+SP    L+   PAEAALS  RSL S  P ++
Sbjct: 138 GEEPPRRVSPAAVVLAVLLPAEAALSFIRSLSSLAPFSI 176


>04_04_0726 + 27588225-27588685,27588768-27588895,27590523-27591016
          Length = 360

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 289 ADFNDRHKLSAASAGXALDNVNGHGLSLTGTRIPGFGEQLGVAGKVNL 432
           A  N+R + S AS   A  + + HG+ + G   P +G     AG ++L
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSL 220


>01_06_0872 +
           32609792-32610178,32611262-32611387,32611477-32611550,
           32611944-32612013,32612088-32612143,32612236-32612307,
           32612384-32612478,32612660-32612726,32612809-32612938,
           32613135-32613350,32613461-32613591,32614044-32614218,
           32614292-32614382,32614653-32614810,32615059-32615247,
           32615551-32615564,32616003-32616228
          Length = 758

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = -3

Query: 510 GRXGNGXGRVPDRERLGAQXVVVVVEQIDLACDAELLPEAGNAGPGQAQP 361
           GR G G GR   R R G +   V V  +D     E+LP A   G     P
Sbjct: 44  GRGGRGGGRATGRGRAGGRGRGVPVIDLDPDQPCEVLPGAAIGGVAAGGP 93


>05_07_0359 - 29539294-29540832,29542366-29542518
          Length = 563

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/86 (26%), Positives = 31/86 (36%)
 Frame = -1

Query: 410 PSCSPKPGMRVPVRLSPCPFTLSRAXPAEAALSLWRSLKSADPMALSTXLXLPVRGTFRA 231
           P    KPG   P R +P P   S +  A AA +L   +K             P+R   + 
Sbjct: 155 PVLEAKPGRGRP-RKNPLPVASSTSSAAAAATALSLRVKRGPGRPRKNAAATPLRLGVKR 213

Query: 230 APEVPAEXTVKLPAWXRARXGTWXPR 153
            P  P +     P    A+ G   PR
Sbjct: 214 GPGRPRKNAAATPLRLGAKRGPGRPR 239


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -3

Query: 417 CDAELLPEAGNAGPGQAQPV 358
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>12_01_0831 -
           7688342-7688772,7690678-7692610,7693142-7693915,
           7694019-7694142,7696084-7696189,7696346-7696532
          Length = 1184

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 377 PVRLSPCPFTLSRAXPAEAA 318
           P+RLSP P ++SR  P+ AA
Sbjct: 153 PIRLSPSPRSMSRTRPSSAA 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,001
Number of Sequences: 37544
Number of extensions: 194719
Number of successful extensions: 488
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)