Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G11
         (903 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    31   1.5  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +3

Query: 177 KGXXSVLYCPXMAEPDCXXPEVXDFVDXVGPCXVPQCFCDRPNVRNXKTGKCVPESEC 350
           +G   +  C    EP C         D V  C    C C +  VR+  TGKCV +++C
Sbjct: 78  EGDEELKACGSACEPTCDNENPE--CDLV--CMTNVCQCKKGLVRDSATGKCVEKNKC 131


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +3

Query: 171 CPKGXXSVLYCPXMAEPDCXXPEVXDFVDXVGPCXVPQCFCDRPNVRNXKTGKCVP 338
           C  G      C  M  P+    ++   +    P   P+C C   NVRN  TG  +P
Sbjct: 30  CTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPPKCVCTEGNVRNIITGPSLP 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,569,926
Number of Sequences: 27780
Number of extensions: 87473
Number of successful extensions: 111
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)