Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_G09
(968 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 38 0.009
09_06_0359 + 22508900-22509439 38 0.016
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 37 0.021
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 37 0.021
02_01_0160 + 1116160-1116678 36 0.037
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 34 0.20
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 33 0.26
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 32 0.60
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 32 0.79
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 31 1.4
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 31 1.8
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 30 2.4
10_01_0309 + 3417602-3418147 29 4.2
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 38.3 bits (85), Expect = 0.009
Identities = 32/107 (29%), Positives = 40/107 (37%)
Frame = +3
Query: 156 LGKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXHRVIPXXMLXXXXXXXXXXXXX 335
+G++VI L P+T ENFRA + GS HRVI M+
Sbjct: 99 VGRVVIGLYGDDVPQTAENFRALCTGEKGFGY-KGSSFHRVIKDFMI-QGGDFDKGNGTG 156
Query: 336 XNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXNP 476
S G+ K N L G GV+ G GS FI P
Sbjct: 157 GKSIYGRTFKDENFKLVHTGPGVVSMA-NAGPNTNGSQFFICTVKTP 202
>09_06_0359 + 22508900-22509439
Length = 179
Score = 37.5 bits (83), Expect = 0.016
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Frame = +3
Query: 138 LLTXAPLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLX 299
L+ A G++V+EL + PKT ENFR + + GS HR+IP M
Sbjct: 13 LIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFM-C 71
Query: 300 XXXXXXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G N L G GVL G GS FI
Sbjct: 72 QGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMA-NAGPNTNGSQFFI 123
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 37.1 bits (82), Expect = 0.021
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXX 314
P G++V+ L PKT ENFRA + + GS HR+IP M+
Sbjct: 63 PAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMI-QGGDF 121
Query: 315 XXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFIT 461
S G N + G G+L G GS FIT
Sbjct: 122 TLGDGRGGESIYGTKFADENFKIKHTGPGLLSMA-NAGRDTNGSQFFIT 169
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 37.1 bits (82), Expect = 0.021
Identities = 32/102 (31%), Positives = 38/102 (37%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXHRVIPXXMLXXXXXXXXXXXX 332
P G+IVI L V PKT +NFRA + G HR+I M+
Sbjct: 78 PAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGY-KGCSFHRIIKDFMI-QGGDFQNNNGT 135
Query: 333 XXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G+ N L G GVL G GS FI
Sbjct: 136 GGRSIYGECFDDENFTLKHTGPGVLSMA-NAGPDTNGSQFFI 176
>02_01_0160 + 1116160-1116678
Length = 172
Score = 36.3 bits (80), Expect = 0.037
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +3
Query: 150 APLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXM 293
AP G+IV+EL + P+T ENFRA + + GS HRVIP M
Sbjct: 15 APAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFM 68
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 33.9 bits (74), Expect = 0.20
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXH 272
G+IV+EL + V P+T ENFRA + S G H
Sbjct: 47 GRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLH 84
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXH 272
G+IVIEL + V P+T ENFRA + G H
Sbjct: 40 GRIVIELYASVVPRTAENFRALCTGEKGVGAVTGKHLH 77
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 32.3 bits (70), Expect = 0.60
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +3
Query: 156 LGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXML 296
+G+IVI L V PKT NFRA E GS HR+IP M+
Sbjct: 51 IGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMI 103
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 31.9 bits (69), Expect = 0.79
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXML 296
P G+IV+ L PKT ENFRA + + G+ HR+IP M+
Sbjct: 52 PAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMI 105
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 31.1 bits (67), Expect = 1.4
Identities = 33/114 (28%), Positives = 40/114 (35%), Gaps = 7/114 (6%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT-------XGSIXHRVIPXXMLXXXXX 311
P ++V EL + V P+T ENFRA T GS+ HRVI M
Sbjct: 19 PDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFM-AQGGD 77
Query: 312 XXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXN 473
S G + N L G+L G GS FIT N
Sbjct: 78 FSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMA-NAGPNTNGSQFFITFKHN 130
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 30.7 bits (66), Expect = 1.8
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXHRVIPXXMLXXXXXXXXXXXXXX 338
G + +EL +TP+TCENF G I HR I M+
Sbjct: 354 GDLNLELHCDITPRTCENFLTHCE----NGYYNGLIFHRSIKNFMI--QGGDPTGTGSGG 407
Query: 339 NSFXGKXLK-XXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXNP 476
S GK K N L G GV+ G GS FI P
Sbjct: 408 ESIWGKPFKDELNSKLIHSGRGVVSMA-NSGPHTNGSQFFILYKSAP 453
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFR 218
P G+I +EL + + PKT ENFR
Sbjct: 49 PAGRIKMELFADIVPKTAENFR 70
>10_01_0309 + 3417602-3418147
Length = 181
Score = 29.5 bits (63), Expect = 4.2
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 8/115 (6%)
Frame = +3
Query: 156 LGKIVIELRSXVTPKTCENFR----AXXHWREXXSVT--XGSIXHRVIPXXMLXXXXXXX 317
+G++VIEL + P T ENFR R S GS HRV+P M
Sbjct: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITA 83
Query: 318 XXXXXXXNSFXG--KXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXNP 476
++ G + + G GV+ G GS FIT P
Sbjct: 84 GNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMA-NAGPNTNGSQFFITVDKAP 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,748,098
Number of Sequences: 37544
Number of extensions: 114718
Number of successful extensions: 142
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2811537600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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