Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_G09
(968 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 42 8e-04
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 41 0.001
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 39 0.004
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 38 0.010
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 38 0.013
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 38 0.013
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 38 0.013
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 37 0.018
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 37 0.018
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 37 0.023
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 37 0.023
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 36 0.053
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 34 0.16
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 32 0.66
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 32 0.66
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 30 2.0
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 30 2.0
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 41.5 bits (93), Expect = 8e-04
Identities = 36/109 (33%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Frame = +3
Query: 150 APLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXX 311
AP GKIV+EL + TPKT ENFRA + + GS HRVIP M
Sbjct: 16 APAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFM-CQGGD 74
Query: 312 XXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G + N G G+L G GS FI
Sbjct: 75 FTKGNGTGGESIYGAKFEDENFERKHTGPGILSMA-NAGANTNGSQFFI 122
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 41.1 bits (92), Expect = 0.001
Identities = 35/112 (31%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Frame = +3
Query: 141 LTXAPLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXX 302
L+ P+G+I +EL + TP T ENFRA + GSI HRVIP M
Sbjct: 12 LSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFM-CQ 70
Query: 303 XXXXXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G K N G G+L G GS FI
Sbjct: 71 GGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMA-NSGPNTNGSQFFI 121
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXX 314
P G+IV+EL + TP+T ENFRA + T GS HRVIP M
Sbjct: 16 PAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFM-CQGGDF 74
Query: 315 XXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G + N G G+L G GS FI
Sbjct: 75 TAGNGTGGESIYGSKFEDENFERKHTGPGILSMA-NAGANTNGSQFFI 121
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 37.9 bits (84), Expect = 0.010
Identities = 33/107 (30%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXXXX 320
G++VI L PKT ENFRA + + GS HR+IP M+
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMI-QGGDFTH 104
Query: 321 XXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFIT 461
S G+ N L G GVL G GS FIT
Sbjct: 105 GNGMGGESIYGQKFADENFKLKHTGPGVLSMA-NSGEDTNGSQFFIT 150
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 37.5 bits (83), Expect = 0.013
Identities = 33/100 (33%), Positives = 38/100 (38%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXHRVIPXXMLXXXXXXXXXXXXXX 338
G+IVI L P+T ENFRA + GS HRVI M+
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGY-KGSTFHRVIRDFMI-QGGDFEKGNGTGG 164
Query: 339 NSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G+ K N L G GVL G GS FI
Sbjct: 165 KSVYGRTFKDENFKLSHVGPGVLSMA-NAGPNTNGSQFFI 203
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 37.5 bits (83), Expect = 0.013
Identities = 36/115 (31%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT-------XGSIXHRVIPXXMLXXXXX 311
P+ +IVIEL + V PKT ENFRA + GS HRVI M
Sbjct: 19 PVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDF 78
Query: 312 XXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXNP 476
+ + GK N L G GVL G GS FI P
Sbjct: 79 SNGNGTGGESIYGGK-FSDENFRLDHDGAGVLSMA-NCGPNTNGSQFFILFKRQP 131
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 37.5 bits (83), Expect = 0.013
Identities = 36/115 (31%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFRAXXHWREXXSVT-------XGSIXHRVIPXXMLXXXXX 311
P+ +IVIEL + V PKT ENFRA + GS HRVI M
Sbjct: 19 PVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDF 78
Query: 312 XXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFITXXXNP 476
+ + GK N L G GVL G GS FI P
Sbjct: 79 SNGNGTGGESIYGGK-FSDENFRLDHDGAGVLSMA-NCGPNTNGSQFFILFKRQP 131
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 37.1 bits (82), Expect = 0.018
Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXXXX 320
G++V+EL + VTP+T NFRA GS HR+IP M
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFM-CQGGDFTR 76
Query: 321 XXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G + N L G G+L G GS FI
Sbjct: 77 GNGTGGESIYGSKFEDENFKLKHTGPGILSMA-NSGPNTNGSQFFI 121
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 37.1 bits (82), Expect = 0.018
Identities = 32/113 (28%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Frame = +3
Query: 141 LTXAPLGKIVIELRSXVTPKTCENFRAXXHWREXXS------VTXGSIXHRVIPXXMLXX 302
+ +P G+I+I L + PKT ENFR+ + GS HR+IP M+
Sbjct: 67 INGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMI-Q 125
Query: 303 XXXXXXXXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFIT 461
S G N L G G L G GS FIT
Sbjct: 126 GGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMA-NSGPDSNGSQFFIT 177
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 36.7 bits (81), Expect = 0.023
Identities = 31/100 (31%), Positives = 38/100 (38%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVTXGSIXHRVIPXXMLXXXXXXXXXXXXXX 338
G+IV+ L V PKT ENFRA + GS HR+I M+
Sbjct: 109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGY-KGSSFHRIIKDFMIQGGDFTEGNGTGGI 167
Query: 339 NSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G + N L G G+L G GS FI
Sbjct: 168 -SIYGAKFEDENFTLKHTGPGILSMA-NAGPNTNGSQFFI 205
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 36.7 bits (81), Expect = 0.023
Identities = 33/106 (31%), Positives = 38/106 (35%), Gaps = 6/106 (5%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXXXX 320
G+IV+EL + TP+T ENFRA GS HRVIP M
Sbjct: 19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFM-CQGGDFTA 77
Query: 321 XXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFI 458
S G K N G G+L G GS FI
Sbjct: 78 GNGTGGESIYGSKFKDENFIKKHTGPGILSMA-NAGANTNGSQFFI 122
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 35.5 bits (78), Expect = 0.053
Identities = 33/107 (30%), Positives = 38/107 (35%), Gaps = 6/107 (5%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFRAXXHWREXXSVT------XGSIXHRVIPXXMLXXXXXXXX 320
G+IV+ L PKT ENFRA + GS HR+IP ML
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFML-QGGDFTH 107
Query: 321 XXXXXXNSFXGKXLKXXNLXLXPXGXGVLXXG*XPGXXXXGSXXFIT 461
S G+ N L G G L G GS FIT
Sbjct: 108 GNGMGGESIYGEKFADENFKLKHTGPGFLSMA-NAGQDTNGSQFFIT 153
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFR 218
P G+IVIEL + +TP+T ENFR
Sbjct: 16 PAGRIVIELFADLTPRTAENFR 37
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 156 LGKIVIELRSXVTPKTCENFRA 221
LG+IVI L V PKT ENFRA
Sbjct: 60 LGRIVIGLYGTVVPKTVENFRA 81
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 159 GKIVIELRSXVTPKTCENFR 218
G+IVIEL V PKT ENFR
Sbjct: 18 GRIVIELYDDVVPKTAENFR 37
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 153 PLGKIVIELRSXVTPKTCENFR 218
P G+I +EL + + PKT ENFR
Sbjct: 44 PAGRIKMELFADIAPKTAENFR 65
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 135 SLLTXAPLGKIVIELRSXVTPKTCENF 215
S+L LG IVI+L S P TC+NF
Sbjct: 2 SVLIVTSLGDIVIDLHSDKCPLTCKNF 28
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,145,595
Number of Sequences: 28952
Number of extensions: 92086
Number of successful extensions: 136
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2343832968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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