Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G08
         (936 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...   111   1e-24
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...   111   1e-24
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...   111   1e-24
BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p pro...    30   5.2  
AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-P...    30   5.2  

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score =  111 bits (267), Expect = 1e-24
 Identities = 52/65 (80%), Positives = 55/65 (84%)
 Frame = +1

Query: 283 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTFGRRRG 462
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ FGRRRG
Sbjct: 82  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRG 141

Query: 463 PNSNS 477
           PN+NS
Sbjct: 142 PNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score =  111 bits (267), Expect = 1e-24
 Identities = 52/65 (80%), Positives = 55/65 (84%)
 Frame = +1

Query: 283 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTFGRRRG 462
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ FGRRRG
Sbjct: 67  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRG 126

Query: 463 PNSNS 477
           PN+NS
Sbjct: 127 PNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score =  111 bits (267), Expect = 1e-24
 Identities = 52/65 (80%), Positives = 55/65 (84%)
 Frame = +1

Query: 283 VPLLGGKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVVQTFGRRRG 462
           +P+LGGKVHGSLARAGKVKGQTPKVE        TGRAKRRIQYNRRFVN VQ FGRRRG
Sbjct: 67  IPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRG 126

Query: 463 PNSNS 477
           PN+NS
Sbjct: 127 PNANS 131


>BT029081-1|ABJ17014.1|  339|Drosophila melanogaster IP10546p
           protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 359 STLGVCPLTLPARAKDPCTLPPSNGTVRASSDDESSET 246
           ST   C  T P    D  T  PS+ +  ASS + SSE+
Sbjct: 238 STTSSCVTTRPTSCSDTTTQSPSDSSSTASSTESSSES 275


>AE014296-2627|AAF49545.1|  339|Drosophila melanogaster CG13075-PA
           protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 359 STLGVCPLTLPARAKDPCTLPPSNGTVRASSDDESSET 246
           ST   C  T P    D  T  PS+ +  ASS + SSE+
Sbjct: 238 STTSSCVTTRPTSCSDTTTQSPSDSSSTASSTESSSES 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,133
Number of Sequences: 53049
Number of extensions: 199647
Number of successful extensions: 565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4628299878
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)