Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G07
         (904 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    71   4e-11
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    69   1e-10
UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Re...    55   3e-06
UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep: Cecro...    45   0.002
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    44   0.004
UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    35   2.5  
UniRef50_A3LWB9 Cluster: DNA-directed RNA polymerase; n=1; Pichi...    33   7.5  

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
           Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
           (Silk moth)
          Length = 63

 Score = 70.9 bits (166), Expect = 4e-11
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = +1

Query: 205 PEPRWKLFKKIEXVGRXVRDGLIKAGPAIAVIGQAKSLGK 324
           PEPRWK+FKKIE +GR +RDG++KAGPAI V+G AK++GK
Sbjct: 24  PEPRWKIFKKIEKMGRNIRDGIVKAGPAIEVLGSAKAIGK 63


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Rep:
           Cecropin-A precursor - Hyalophora cecropia (Cecropia
           moth)
          Length = 64

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 205 PEPRWKLFKKIEXVGRXVRDGLIKAGPAIAVIGQAKSLGK 324
           PEP+WKLFKKIE VG+ +RDG+IKAGPA+AV+GQA  + K
Sbjct: 24  PEPKWKLFKKIEKVGQNIRDGIIKAGPAVAVVGQATQIAK 63


>UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Rep:
           Cecropin A - Plutella xylostella (Diamondback moth)
          Length = 66

 Score = 54.8 bits (126), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = +1

Query: 211 PRWKLFKKIEXVGRXVRDGLIK-AGPAIAVIGQAKSLGK*T 330
           PRWK FKK+E VGR +R+G+I+  GPA+AVIGQA S+ + T
Sbjct: 24  PRWKPFKKLEKVGRNIRNGIIRYNGPAVAVIGQATSIARPT 64


>UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep:
           Cecropin-D - Antheraea pernyi (Chinese oak silk moth)
          Length = 36

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +1

Query: 217 WKLFKKIEXVGRXVRDGLIKAGPAIAVIGQAKSLGK 324
           W  FK++E  G+ VRD +I AGPA+A + QA +L K
Sbjct: 1   WNPFKELERAGQRVRDAIISAGPAVATVAQATALAK 36


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +1

Query: 217 WKLFKKIEXVGRXVRDGLIKAGPAIAVIGQAKSL 318
           W  FK++E VG+ VRD +I AGPAI V+ +AK L
Sbjct: 23  WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGL 56


>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 217 WKLFKKIEXVGRXVRDGLIKAGPAIAVIGQAKSL 318
           W +FK+IE      RD +I AGPA+  +  A S+
Sbjct: 23  WNIFKEIERAVARTRDAVISAGPAVRTVAAATSV 56


>UniRef50_A3LWB9 Cluster: DNA-directed RNA polymerase; n=1; Pichia
           stipitis|Rep: DNA-directed RNA polymerase - Pichia
           stipitis (Yeast)
          Length = 1202

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -3

Query: 395 LEIHNYLQSCFKLXASLEFNDKVYFP 318
           L IH+YL   FK+  SL FN  +YFP
Sbjct: 455 LRIHSYLYQQFKIYDSLAFNKSLYFP 480


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,118,884
Number of Sequences: 1657284
Number of extensions: 8253316
Number of successful extensions: 18622
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18609
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)