Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G07
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0088 - 698169-698614,699514-700819,703041-703148                 29   6.7  
01_02_0026 - 10314159-10314413,10315263-10315341,10316347-10316585     29   6.7  

>12_01_0088 - 698169-698614,699514-700819,703041-703148
          Length = 619

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 252 AXHXLNFLEELPPGLGSSADRAESQHQREDEAQNTYKXHF 133
           A H + F +  P   GSS+  + SQH+R   ++  +K H+
Sbjct: 580 AVHDIGFRD--PTTYGSSSSSSSSQHRRRSSSKVDHKHHY 617


>01_02_0026 - 10314159-10314413,10315263-10315341,10316347-10316585
          Length = 190

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 272 INPSRTXRPTXSIFLKSFHLGS 207
           +  SR  +PT ++FLK+FHL S
Sbjct: 74  LRSSRGGKPTPTLFLKNFHLAS 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,962
Number of Sequences: 37544
Number of extensions: 211953
Number of successful extensions: 348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)