Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G07
         (904 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.9  
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)                   30   2.9  
SB_25845| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.8  

>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 391

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 204 SSADRAESQHQREDEAQNTYKXHFTEXLXCRRIQNXN 94
           +  D  E + + E+E +++Y+  +TE L  RR+ + N
Sbjct: 341 NQVDGEEEEEEEEEEEEDSYEDEYTEILQRRRVVSFN 377


>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
          Length = 5087

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -2

Query: 204  SSADRAESQHQREDEAQNTYKXHFTEXLXCRRIQNXN 94
            +  D  E + + E+E +++Y+  +TE L  RR+ + N
Sbjct: 985  NQVDGEEEEEEEEEEEEDSYEDEYTEILQRRRVVSFN 1021


>SB_25845| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 724 RYTQKKKNENLNFLNIHSNKTYNVKLKD 641
           R+ QK+K E  N  NIH N +   +LKD
Sbjct: 140 RFLQKRKREIRNSANIHCNASQAWRLKD 167


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,395,947
Number of Sequences: 59808
Number of extensions: 257078
Number of successful extensions: 512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)