BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_G05
(887 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 130 7e-32
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 129 1e-31
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 127 4e-31
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 127 4e-31
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 65 3e-12
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 60 1e-10
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 58 4e-10
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 56 2e-09
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 53 1e-08
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 52 2e-08
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 51 4e-08
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 48 3e-07
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 48 3e-07
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 43 1e-05
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 130 bits (313), Expect = 7e-32
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Frame = +1
Query: 133 EFKTTPVDAAFVEKQKXILSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 309
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 310 MMMYKVG-FLPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFL 486
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+ MF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 487 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIK 666
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ D K + YG K
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL----YDPKFGF-YGNGK 196
Query: 667 XNEQFVMYANYSNS--LTYPN---XEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGA 831
N ++YANY+ + + Y N E+ + Y TED+GL AYYYYF F K G
Sbjct: 197 YN---IVYANYTATYPMDYYNNFYTEEYLNYYTEDIGLNAYYYYFMMDYSFLLGGDKFGL 253
Query: 832 FXXRRGE 852
RRGE
Sbjct: 254 IKDRRGE 260
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 129 bits (311), Expect = 1e-31
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Frame = +1
Query: 133 EFKTTPVDAAFVEKQKXILSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 309
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 310 MMMYKVG-FLPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFL 486
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+ MF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 487 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIK 666
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ D K + YG K
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL----YDPKFGF-YGNGK 196
Query: 667 XNEQFVMYANYSNS--LTYPN---XEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGA 831
N ++YANY+ + + Y N E+ + Y TED+GL AYYYYF F K G
Sbjct: 197 YN---IVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGL 253
Query: 832 FXXRRGE 852
RRGE
Sbjct: 254 IKDRRGE 260
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 127 bits (307), Expect = 4e-31
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Frame = +1
Query: 133 EFKTTPVDAAFVEKQKXILSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 309
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 310 MMMYKVG-FLPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFL 486
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+ MF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 487 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIK 666
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ + K + YG K
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL----YNPKFGF-YGNGK 196
Query: 667 XNEQFVMYANYSNS--LTYPN---XEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGA 831
N V+YANY+ + + Y N E+ + Y TED+GL AYYYYF F K G
Sbjct: 197 YN---VVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGL 253
Query: 832 FXXRRGE 852
RRGE
Sbjct: 254 IKDRRGE 260
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 127 bits (307), Expect = 4e-31
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 7/247 (2%)
Frame = +1
Query: 133 EFKTTPVDAAFVEKQKXILSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 309
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 310 MMMYKVG-FLPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFL 486
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+ MF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 487 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIK 666
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ + K + YG K
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL----YNPKFGF-YGNGK 196
Query: 667 XNEQFVMYANYSNS--LTYPN---XEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGA 831
N V+YANY+ + + Y N E+ + Y TED+GL AYYYYF F K G
Sbjct: 197 YN---VVYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGL 253
Query: 832 FXXRRGE 852
RRGE
Sbjct: 254 IKDRRGE 260
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 64.9 bits (151), Expect = 3e-12
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 4/216 (1%)
Frame = +1
Query: 217 NYEAEYYK-VAQDFNIEASKDCYTNMKAYENFMMMYKVGF-LPKNLEFSIFYEKMRXEAX 390
NY + YK + Q S + T + + + LP+ +FS+F K R A
Sbjct: 34 NYLTDRYKPIGQSLQTRFSSEADTRIAVRATTLPDIRFAEELPRRGDFSLFIPKHRKIAG 93
Query: 391 ALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQRSDTANFVLPAPYEAYPQY 570
L KLF D + + YAR +N ++ YA +AI R DT N +P+ ++ +P
Sbjct: 94 DLIKLFLDQPDVDTLMSVSSYARDRLNPVLYQYAMAVAIQHRPDTKNLNIPSFFDLFPDS 153
Query: 571 FVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYANYSNSLTYPNXED--RIAY 744
FV+ V K L E+ G + N++ + + + + T + ED R+AY
Sbjct: 154 FVDPTVIPK----------LREE-----GAVVNNQRDRITIDIAMNYTASDREDEQRLAY 198
Query: 745 LTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
ED+G+ +++++ HL + RRGE
Sbjct: 199 FREDIGVNLHHWHW--HLVYPGEGPNNVVNKDRRGE 232
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 59.7 bits (138), Expect = 1e-10
Identities = 45/173 (26%), Positives = 76/173 (43%)
Frame = +1
Query: 334 LPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQ 513
+P++ EF++F R A L D + A YAR +N +F YA +A++
Sbjct: 76 VPRHGEFNLFNPAQRQVAGRLVGDLLSQPDPQAMLSVAAYARDRLNPTLFQYALAVALVH 135
Query: 514 RSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYA 693
R DT N +P+ E +P FV D L K+ +++ E+ +
Sbjct: 136 RKDTGNVPVPSFLEMFPTRFV--------------DPALFPKLVEEGFVVQQGERVAIEV 181
Query: 694 NYSNSLTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
S S + + E R+AY ED+G+ +++++ HL + RRGE
Sbjct: 182 PPSFSASEADPEQRLAYFREDIGVNLHHWHW--HLVYPQEGPLEVVDKDRRGE 232
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 58.0 bits (134), Expect = 4e-10
Identities = 46/173 (26%), Positives = 76/173 (43%)
Frame = +1
Query: 334 LPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQ 513
+P+ FS+F K R A L LF D E A Y+R +N +F YA +AI
Sbjct: 75 VPRRGGFSLFNPKHRQIAGDLINLFMNQPDVETLMSVAAYSRDRLNPILFQYALSVAIQH 134
Query: 514 RSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYA 693
R DT + +P+ E +P FV+ V K+ +G I++ + +
Sbjct: 135 RPDTKDLNIPSFLELFPDSFVDPSVFPKL----REEG----------AIVQAENRMTIDI 180
Query: 694 NYSNSLTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
+ + + E R+AY ED+G+ +++++ HL + RRGE
Sbjct: 181 PMNYTASDREDEQRLAYFREDIGVNLHHWHW--HLVYPGEGPDRVVNKDRRGE 231
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 55.6 bits (128), Expect = 2e-09
Identities = 43/167 (25%), Positives = 73/167 (43%)
Frame = +1
Query: 352 FSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQRSDTAN 531
FS+F K R A AL LF DF A Y R +N +F Y+ +A+ R DT +
Sbjct: 81 FSLFAPKHRDAAGALINLFLQQPDFATLMSVATYCRDRLNPVLFQYSLAVAVQHREDTKD 140
Query: 532 FVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYANYSNSL 711
+P+ +P FV+ V K+ +G ++ + V+ + +
Sbjct: 141 VNIPSIVSLFPDQFVDPAVFPKL----REEG----------AAVQQENRMVIDIPPNYTA 186
Query: 712 TYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
+ E R+AY ED+G+ +++++ HL + + RRGE
Sbjct: 187 SDREDEQRMAYFREDIGVNMHHWHW--HLVYPGDGPDEVVRKDRRGE 231
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 52.8 bits (121), Expect = 1e-08
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Frame = +1
Query: 352 FSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQRSDTAN 531
FS+F + R A L KLF + + A YAR +N +F YA +A++ R DT +
Sbjct: 96 FSLFNPEHRKAAGKLTKLFLDQPNADRLVDVAAYARDRLNAPLFQYALSVALLHRPDTKS 155
Query: 532 FVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFV-MYANYSNS 708
+P+ +P F++ + +M M +G + ++ N + + NY+ +
Sbjct: 156 VSVPSLLHLFPDQFIDPAAQVRM----MEEGSI---------VLDENRMPIPIPMNYTAT 202
Query: 709 LTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
P E R+A+ ED+G+ +++++ HL + + RRGE
Sbjct: 203 DAEP--EQRMAFFREDIGVNLHHWHW--HLVYPASGPPDVVRKDRRGE 246
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 52.4 bits (120), Expect = 2e-08
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Frame = +1
Query: 334 LPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQ 513
+P+ FS+F + R A L KLF D + A YAR +N +F YA A++
Sbjct: 89 VPRRGAFSLFIPEHRVIAGRLIKLFLDQPDADTLGDVAAYARDRLNGPLFQYALASALLH 148
Query: 514 RSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFV-MY 690
RSDT++ +P+ +P F++ + ++ + +++ N + +
Sbjct: 149 RSDTSDVPVPSFLHLFPDQFIDPAA-----FPQIRE--------EGRAVLQPNRMSIDIP 195
Query: 691 ANYSNSLTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
NY+ S E R+AY ED+G+ +++++ HL + + RRGE
Sbjct: 196 LNYTASDRV--TEQRLAYFREDIGVNLHHWHW--HLVYPAEGPERVVRKDRRGE 245
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 51.2 bits (117), Expect = 4e-08
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Frame = +1
Query: 352 FSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQRSDTAN 531
FS+F R A L +LF + A Y R +N MF YA IA+I R DT +
Sbjct: 82 FSVFNAAHRRAAGQLIQLFLDQPNPTTLGAVAAYVRDRVNAPMFQYALAIALIHRDDTRD 141
Query: 532 FVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFV-MYANYSNS 708
+P+ E +P FV+ V ++ LD + N + + + +NY+ S
Sbjct: 142 VEIPSFLELFPDRFVDPAV---FPQLREESNLLD----------RGNRRAIDIPSNYTAS 188
Query: 709 LTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
E R+AY ED+GL +++++ HL + RRGE
Sbjct: 189 DRV--DEQRVAYWREDIGLSLHHWHW--HLVYPATGPDRVVRKDRRGE 232
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 48.4 bits (110), Expect = 3e-07
Identities = 39/157 (24%), Positives = 73/157 (46%)
Frame = +1
Query: 334 LPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQ 513
L + +FS+F + R A L +F + E A +AR +N +F YA +A++
Sbjct: 74 LGRQEQFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLH 133
Query: 514 RSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYA 693
R DT + LP E +P +V+ +V +++ +E G+ V+
Sbjct: 134 RKDTHDLDLPTIIEVFPDKYVDSKVFSQI---------REEATVVPEGM---RMPIVIPK 181
Query: 694 NYSNSLTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPF 804
+Y+ S + E R+ Y ED+G+ +++++ PF
Sbjct: 182 DYTASDL--DEEHRLWYFREDIGVNLHHWHWHLVYPF 216
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 48.4 bits (110), Expect = 3e-07
Identities = 39/157 (24%), Positives = 73/157 (46%)
Frame = +1
Query: 334 LPKNLEFSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQ 513
L + +FS+F + R A L +F + E A +AR +N +F YA +A++
Sbjct: 74 LGRQEQFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLH 133
Query: 514 RSDTANFVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYA 693
R DT + LP E +P +V+ +V +++ +E G+ V+
Sbjct: 134 RKDTHDLDLPTIIEVFPDKYVDSKVFSQI---------REEATVVPEGM---RMPIVIPK 181
Query: 694 NYSNSLTYPNXEDRIAYLTEDVGLXAYYYYFXSHLPF 804
+Y+ S + E R+ Y ED+G+ +++++ PF
Sbjct: 182 DYTASDL--DEEHRLWYFREDIGVNLHHWHWHLVYPF 216
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 42.7 bits (96), Expect = 1e-05
Identities = 41/167 (24%), Positives = 76/167 (45%)
Frame = +1
Query: 352 FSIFYEKMRXEAXALFKLFYYAXDFECFYKTACYARVYMNQAMFLYAYYIAIIQRSDTAN 531
FSIF+ + A L +LF + + A + R +N +F YA +A++ R+DT +
Sbjct: 82 FSIFHPSHQRVASQLIELFLEQSNPDTLTAMAVFVRDRVNGPLFQYALSVALMHRTDTRD 141
Query: 532 FVLPAPYEAYPQYFVNXEVKNKMDYVKMMDGCLDEKICYNYGIIKXNEQFVMYANYSNSL 711
+P+ E +P +V+ V ++ +E + G + E + N++ S
Sbjct: 142 VEIPSFLELFPDRYVDPAVFPQLR---------EEGTLVDQGDRRAIE---IPMNFTASD 189
Query: 712 TYPNXEDRIAYLTEDVGLXAYYYYFXSHLPFWWNSGKXGAFXXRRGE 852
E R+AY ED+G+ +++++ HL + RRGE
Sbjct: 190 RVD--EQRLAYWREDIGVNLHHWHW--HLVYPARGPNRIVRKDRRGE 232
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,742
Number of Sequences: 2352
Number of extensions: 14182
Number of successful extensions: 44
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -