Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_G02
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 515 FYGSWPFAGLLLTCSFLRYHPDSVDNR 435
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 619 DTRRFPLXSSLVRSPVPTLXLTGYLSAF 702
           D+RR PL  ++ + P P   +  Y  +F
Sbjct: 76  DSRRLPLRDAVEKRPPPDEPIDDYEPSF 103


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 538 EKRQQRGLFTVPGLLLAFCSHVLSCVITL 452
           +KR   G FT   +  + C+H++    TL
Sbjct: 533 QKRPGAGKFTPEDINPSLCTHIIYAFATL 561


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,141
Number of Sequences: 336
Number of extensions: 2710
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)