Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F24
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF034091-1|AAC70904.1|  206|Homo sapiens nuclear localization si...    94   7e-19
CR456532-1|CAG30418.1|  206|Homo sapiens NLVCF protein.                92   2e-18
BC009707-1|AAH09707.1|  206|Homo sapiens mitochondrial ribosomal...    92   2e-18
AJ295637-1|CAC00535.1|  206|Homo sapiens URIM protein protein.         92   2e-18
Y15164-1|CAA75436.1| 1012|Homo sapiens Cxorf5 (71-7A) protein pr...    31   5.7  
BC096344-1|AAH96344.1|  972|Homo sapiens OFD1 protein protein.         31   5.7  

>AF034091-1|AAC70904.1|  206|Homo sapiens nuclear localization
           signal containing protein deleted in Velo-Cardio-Facial
           sy protein.
          Length = 206

 Score = 93.9 bits (223), Expect = 7e-19
 Identities = 50/125 (40%), Positives = 71/125 (56%)
 Frame = +2

Query: 395 LEKNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDXYMNN 574
           LEK  + L PI+    PL  +D  K  +RP V+L+ EE E R LL K+W+ YK+  +   
Sbjct: 75  LEKATQELIPIEDFITPLKFLD--KARERPQVELTFEETERRALLLKKWSLYKQQEHKME 132

Query: 575 XAQVDRIXAAQRRALDRLYEESEDLYNEAIMPDLPLLPYTISGPVATPPIKDYESPDGEY 754
              +  +  AQ+ AL+ L  ES  L+ EAI  D  L P+   GP  TPPI +Y+ P+G Y
Sbjct: 133 RDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRY 192

Query: 755 XDVSK 769
            D++K
Sbjct: 193 NDITK 197


>CR456532-1|CAG30418.1|  206|Homo sapiens NLVCF protein.
          Length = 206

 Score = 92.3 bits (219), Expect = 2e-18
 Identities = 50/125 (40%), Positives = 70/125 (56%)
 Frame = +2

Query: 395 LEKNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDXYMNN 574
           LEK  + L PI+    PL  +D  K  +RP V+L+ EE E R LL K+W+ YK+      
Sbjct: 75  LEKATQELIPIEDFITPLKFLD--KARERPQVELTFEETERRALLLKKWSLYKQQERKME 132

Query: 575 XAQVDRIXAAQRRALDRLYEESEDLYNEAIMPDLPLLPYTISGPVATPPIKDYESPDGEY 754
              +  +  AQ+ AL+ L  ES  L+ EAI  D  L P+   GP  TPPI +Y+ P+G Y
Sbjct: 133 RDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRY 192

Query: 755 XDVSK 769
            D++K
Sbjct: 193 NDITK 197


>BC009707-1|AAH09707.1|  206|Homo sapiens mitochondrial ribosomal
           protein L40 protein.
          Length = 206

 Score = 92.3 bits (219), Expect = 2e-18
 Identities = 50/125 (40%), Positives = 70/125 (56%)
 Frame = +2

Query: 395 LEKNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDXYMNN 574
           LEK  + L PI+    PL  +D  K  +RP V+L+ EE E R LL K+W+ YK+      
Sbjct: 75  LEKATQELIPIEDFITPLKFLD--KARERPQVELTFEETERRALLLKKWSLYKQQERKME 132

Query: 575 XAQVDRIXAAQRRALDRLYEESEDLYNEAIMPDLPLLPYTISGPVATPPIKDYESPDGEY 754
              +  +  AQ+ AL+ L  ES  L+ EAI  D  L P+   GP  TPPI +Y+ P+G Y
Sbjct: 133 RDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRY 192

Query: 755 XDVSK 769
            D++K
Sbjct: 193 NDITK 197


>AJ295637-1|CAC00535.1|  206|Homo sapiens URIM protein protein.
          Length = 206

 Score = 92.3 bits (219), Expect = 2e-18
 Identities = 50/125 (40%), Positives = 70/125 (56%)
 Frame = +2

Query: 395 LEKNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDXYMNN 574
           LEK  + L PI+    PL  +D  K  +RP V+L+ EE E R LL K+W+ YK+      
Sbjct: 75  LEKATQELIPIEDFITPLKFLD--KARERPQVELTFEETERRALLLKKWSLYKQQERKME 132

Query: 575 XAQVDRIXAAQRRALDRLYEESEDLYNEAIMPDLPLLPYTISGPVATPPIKDYESPDGEY 754
              +  +  AQ+ AL+ L  ES  L+ EAI  D  L P+   GP  TPPI +Y+ P+G Y
Sbjct: 133 RDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRY 192

Query: 755 XDVSK 769
            D++K
Sbjct: 193 NDITK 197


>Y15164-1|CAA75436.1| 1012|Homo sapiens Cxorf5 (71-7A) protein
            protein.
          Length = 1012

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 473  YKRPPV-QLSVEEIEARELLQKEWARYKRDXYMNNXAQVDRIXAAQRRALDRLYEE 637
            Y+ P V Q  +EE +  E ++++  + +R       + +  +   +RR L++LY+E
Sbjct: 863  YQHPSVDQKQIEEQKEEEKIREQQVKERRQREERRQSNLQEVLERERRELEKLYQE 918


>BC096344-1|AAH96344.1|  972|Homo sapiens OFD1 protein protein.
          Length = 972

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 473 YKRPPV-QLSVEEIEARELLQKEWARYKRDXYMNNXAQVDRIXAAQRRALDRLYEE 637
           Y+ P V Q  +EE +  E ++++  + +R       + +  +   +RR L++LY+E
Sbjct: 823 YQHPSVDQKQIEEQKEEEKIREQQVKERRQREERRQSNLQEVLERERRELEKLYQE 878


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,888,414
Number of Sequences: 237096
Number of extensions: 1293059
Number of successful extensions: 2460
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)