Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F24
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099916-4|AAC68778.1|  189|Caenorhabditis elegans Hypothetical ...    89   4e-18
AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical ...    29   6.0  
U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AF099916-4|AAC68778.1|  189|Caenorhabditis elegans Hypothetical
           protein F54C4.1 protein.
          Length = 189

 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 39/127 (30%), Positives = 74/127 (58%)
 Frame = +2

Query: 395 LEKNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARYKRDXYMNN 574
           ++K+++  KP+D L + +    ++ + +RP  +L++E+I+ R +  K++ R +      +
Sbjct: 61  MQKHSKKPKPVDELTLDVKSAKNIGERRRPRTELTLEQIDERAIALKDYTRSRLALQQED 120

Query: 575 XAQVDRIXAAQRRALDRLYEESEDLYNEAIMPDLPLLPYTISGPVATPPIKDYESPDGEY 754
            A +     +QR+AL+ L     +LY  A+ P    LP  + GP  TPPI++YE+PDG+Y
Sbjct: 121 DAWIRGAIESQRKALNELKMLKLELYEAAVQPAAKDLPLIVQGPSLTPPIRNYEAPDGDY 180

Query: 755 XDVSKKW 775
            D ++ W
Sbjct: 181 IDTTRNW 187


>AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.4 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 416 LKPIDXLEVPLHLMDS-LKKYKRPPVQLSVE 505
           L PI  +E+P+HL+ S +  +K PP   SV+
Sbjct: 19  LHPIAMIEIPIHLLASYIVIFKTPPTMTSVK 49


>U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical
           protein T17E9.2c protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 401 KNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARY 550
           +N R +K  D  +V   L  SLK+Y   PV  S EE+ A  L+ K+   Y
Sbjct: 242 RNLREMKSTDVPQVFKLLTTSLKQYSLAPVYNSEEEL-AHALVPKKGVVY 290


>U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical
           protein T17E9.2b protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 401 KNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARY 550
           +N R +K  D  +V   L  SLK+Y   PV  S EE+ A  L+ K+   Y
Sbjct: 291 RNLREMKSTDVPQVFKLLTTSLKQYSLAPVYNSEEEL-AHALVPKKGVVY 339


>U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical
           protein T17E9.2a protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +2

Query: 401 KNARXLKPIDXLEVPLHLMDSLKKYKRPPVQLSVEEIEARELLQKEWARY 550
           +N R +K  D  +V   L  SLK+Y   PV  S EE+ A  L+ K+   Y
Sbjct: 289 RNLREMKSTDVPQVFKLLTTSLKQYSLAPVYNSEEEL-AHALVPKKGVVY 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,118,402
Number of Sequences: 27780
Number of extensions: 213395
Number of successful extensions: 458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)