Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F21
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980           31   0.97 
05_05_0381 + 24531622-24532918,24535334-24535468,24535592-245357...    28   9.0  

>06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980
          Length = 208

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +2

Query: 473 DDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVL-GVGTNWNGDHMAF 649
           DD R      +D+ S   +W +  L  N      + +    +YL       +WN + +  
Sbjct: 24  DDDRSGVSLQQDRASVHAAWAVHILHFNGGDVLMLHSAANGRYLAAYRAEGSWNVERL-- 81

Query: 650 GVNSVDSFRAQWYLQPAKYDNDVL 721
            +N + S    WY   ++Y +DVL
Sbjct: 82  NLNRLPSLTFSWYALGSRYGDDVL 105


>05_05_0381 +
           24531622-24532918,24535334-24535468,24535592-24535764,
           24536029-24536239,24536287-24536554,24536664-24536814,
           24536938-24537246
          Length = 847

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -1

Query: 172 RMALGTXEAAAYRDATKRQRXTRAGCRLWSGE 77
           R  LG     AY +A       R GC +W+GE
Sbjct: 378 RRCLGNCSCTAYANANLSAPPGRRGCVMWTGE 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,065,527
Number of Sequences: 37544
Number of extensions: 356248
Number of successful extensions: 851
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)