Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_F20
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 76 3e-14
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 67 2e-11
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 62 5e-10
07_01_1001 - 8460467-8460799 52 6e-07
07_03_0321 + 16757414-16757743 50 3e-06
01_06_0098 - 26416768-26416998 36 0.034
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 30 2.2
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 29 3.9
06_03_0854 + 25400855-25403741,25406174-25407708 29 5.2
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 5.2
11_01_0546 + 4310486-4310703,4310947-4310968 29 6.8
09_02_0082 - 4060018-4061604 29 6.8
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 29 6.8
03_02_0714 + 10617860-10618588 29 6.8
09_02_0565 + 10710770-10711003,10711368-10711527,10712277-107124... 28 9.0
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +1
Query: 109 RYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGREX 288
+ +AA LAVLGG P+A ++ +L SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 2 KLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREK 61
Query: 289 LSSMPVGGG 315
+S+P GGG
Sbjct: 62 FASVPSGGG 70
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 67.3 bits (157), Expect = 2e-11
Identities = 28/71 (39%), Positives = 49/71 (69%)
Frame = +1
Query: 103 KXRYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGR 282
+ ++++A LA L G P P+A + +L SVG E D +++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252
Query: 283 EXLSSMPVGGG 315
E +S+P GGG
Sbjct: 253 EKFASVPCGGG 263
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 62.5 bits (145), Expect = 5e-10
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = +1
Query: 109 RYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGREX 288
++++A +A L G P A + +L SVG E D +++ ++++++GKD+ +LIA GRE
Sbjct: 2 KFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREK 61
Query: 289 LSSMPVGGG 315
+S+P GGG
Sbjct: 62 FASVPSGGG 70
>07_01_1001 - 8460467-8460799
Length = 110
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +1
Query: 109 RYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGREX 288
R+VAA +A +GG P V +L +VG + D ++L + ++ GKD+ +++AAG E
Sbjct: 2 RFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEM 61
Query: 289 LSSMPVG 309
L+ VG
Sbjct: 62 LAFGGVG 68
>07_03_0321 + 16757414-16757743
Length = 109
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/62 (35%), Positives = 38/62 (61%)
Frame = +1
Query: 109 RYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGREX 288
R+VAA +A +GG P V +L +VG + D ++L + ++ GKD+ +++AAG E
Sbjct: 2 RFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEM 61
Query: 289 LS 294
L+
Sbjct: 62 LA 63
>01_06_0098 - 26416768-26416998
Length = 76
Score = 36.3 bits (80), Expect = 0.034
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 145 GKPPPAAAXVEQLLSSVGIEADAEQLKQVITELNGKD 255
G PPP A V+ ++ +V IEAD+ + K ++ L GKD
Sbjct: 13 GPPPPPPAVVK-IIETVHIEADSAEFKSIVQRLTGKD 48
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 314 PPPTGIDDSXSRPAAISCSTSLPLSSVITCLS-CSASASIPTELRSCSTXAAAGG 153
P P DS + + S +++ P +S TC S +ASAS T R+ ST ++ G
Sbjct: 624 PSPAPSPDSATASRSASPTSARPATSSWTCTSAATASASPATAKRTSSTSSSVNG 678
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 314 PPPTGIDDSXSRPAA-ISCSTSLPLSSVITCLSCSASASIPTELRSCSTXAAAGGG 150
P PT S S PA ++ LP++S S SA+A+ P R AAA GG
Sbjct: 34 PSPTSASPSPSPPAPHLAVPLILPITS---SSSASAAAASPESNRGARMAAAASGG 86
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 314 PPPTGIDDSXSRPAAISCSTSLPLSSVITCLSCSASAS 201
PPP I + A +S P+S+V + L+ SASA+
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA 1157
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 266 SCSTSL--PLSSVITCLSCSASASIPTELRSCSTXAAAGGGLPPSTARKD 123
SCS+S PL++ + + S + L SCS A PP AR D
Sbjct: 111 SCSSSATSPLTNALPAGNICPSGRLAKPLSSCSAAATPPAPTPPRAARHD 160
>11_01_0546 + 4310486-4310703,4310947-4310968
Length = 79
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -2
Query: 290 SXSRPAAISCSTSLPLSSVITCLSCSASASIPTELRSCSTXAAAGGGLPPSTA 132
S +P+ ++ + ++PL ++ CL +A+A + S S AAA + PS A
Sbjct: 3 SRKKPSPVAAAAAVPL--LLMCLLFAATAMAASPSSSSSAAAAAASFVEPSDA 53
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 284 SRPAAISCSTSLPLS-SVITCLSCSASASIPTELRSCSTXAAAGGGLPPSTA 132
S P+A+ C++S+PL+ V+ C+ S+P R C+ A+A PP+ A
Sbjct: 481 SSPSAVPCTSSVPLALHVLAPHLCALHVSVP---RPCAPSASA----PPAAA 525
>04_03_0659 -
18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 175 EQLLSSVGIEADAEQLKQVITELNGKDVEQLIAAGRE 285
EQL+ + IE + ++ KQ+I+E N KD+ Q+ A E
Sbjct: 162 EQLIRTSNIE-EKQKRKQIISENNSKDMTQVQANAEE 197
>03_02_0714 + 10617860-10618588
Length = 242
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 109 RYVAASFLAVLGGKPPPAAAXVEQLLSSVGIEADAEQLKQVITELN 246
RY A LA G PP A+A ++ SSVG+ A +L + + +N
Sbjct: 47 RYAARLALAA-GPLPPAASARLKSFESSVGLSRKAFRLGKFVQNVN 91
>09_02_0565 +
10710770-10711003,10711368-10711527,10712277-10712477,
10712564-10712628,10712740-10712767,10712847-10712923,
10713023-10713109,10713572-10713622,10713857-10713937,
10714125-10714346,10714424-10714517,10714608-10714748,
10716383-10716444,10716519-10717106
Length = 696
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 224 LSCSASASIPTELRSCSTXAAAGGGLPPSTA 132
++C+A+A++ + R+ S +AAGGG + A
Sbjct: 16 VACAAAAAVAADRRAFSVTSAAGGGAAAAAA 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,806,277
Number of Sequences: 37544
Number of extensions: 176249
Number of successful extensions: 736
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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