Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_F17
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 213 4e-54
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 166 8e-40
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 131 1e-33
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 142 8e-33
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 132 2e-29
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 129 1e-28
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 126 1e-27
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 122 2e-26
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 119 1e-25
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 117 4e-25
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 113 6e-24
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 107 4e-22
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 101 3e-20
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 87 8e-16
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 73 8e-12
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 68 4e-10
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 65 2e-09
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 62 2e-08
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 58 2e-07
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 55 3e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 54 5e-06
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 53 9e-06
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 53 9e-06
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 52 2e-05
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 50 6e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 50 8e-05
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 47 6e-04
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 45 0.003
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 44 0.007
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.016
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 40 0.065
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 40 0.065
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.086
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.26
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 38 0.26
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 34 5.7
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 5.7
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 33 7.5
UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep... 33 9.9
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 33 9.9
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 213 bits (521), Expect = 4e-54
Identities = 99/117 (84%), Positives = 107/117 (91%)
Frame = +2
Query: 116 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 295
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 296 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 466
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 166 bits (403), Expect = 8e-40
Identities = 79/121 (65%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
Frame = +2
Query: 104 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 280
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 281 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 460
F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 461 G 463
G
Sbjct: 121 G 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 131 bits (316), Expect(2) = 1e-33
Identities = 60/89 (67%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
Frame = +2
Query: 122 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVVFVFGFKTNF 298
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 299 GGGKSTGFALIYDTLDLAKKFEPKHRLAR 385
GGGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 1e-33
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 386 HGLYEKKRPTRKQRKERKNRMKKVRG 463
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 142 bits (345), Expect = 8e-33
Identities = 65/107 (60%), Positives = 85/107 (79%)
Frame = +2
Query: 125 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 304
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 305 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 445
GKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 132 bits (318), Expect = 2e-29
Identities = 63/117 (53%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Frame = +2
Query: 122 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 298
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 299 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 466
GGG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 129 bits (311), Expect = 1e-28
Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 2/117 (1%)
Frame = +2
Query: 122 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 298
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 299 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 466
GGG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 126 bits (303), Expect = 1e-27
Identities = 69/127 (54%), Positives = 85/127 (66%), Gaps = 20/127 (15%)
Frame = +2
Query: 143 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 265
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 266 -VVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 442
V +FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KN
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKN 120
Query: 443 RMKKVRG 463
R+KK+RG
Sbjct: 121 RVKKLRG 127
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 122 bits (293), Expect = 2e-26
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +2
Query: 122 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNF 298
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV + + GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 299 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 451
GGGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 119 bits (286), Expect = 1e-25
Identities = 57/116 (49%), Positives = 76/116 (65%)
Frame = +2
Query: 116 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 295
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 296 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 463
+GGGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 117 bits (282), Expect = 4e-25
Identities = 64/125 (51%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Frame = +2
Query: 98 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDV-- 268
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 269 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 448
V +FGFKT FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR
Sbjct: 62 VSLFGFKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRN 121
Query: 449 KKVRG 463
KK+RG
Sbjct: 122 KKLRG 126
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 113 bits (272), Expect = 6e-24
Identities = 51/115 (44%), Positives = 75/115 (65%)
Frame = +2
Query: 122 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 301
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+V +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 302 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 466
GG +TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 107 bits (257), Expect = 4e-22
Identities = 53/117 (45%), Positives = 75/117 (64%), Gaps = 1/117 (0%)
Frame = +2
Query: 116 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 292
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 293 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 463
FGG ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 101 bits (241), Expect = 3e-20
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 125 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 301
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 302 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 463
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 86.6 bits (205), Expect = 8e-16
Identities = 51/128 (39%), Positives = 76/128 (59%)
Frame = -3
Query: 499 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 320
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 319 SS*LATSEVCLETEYEHYIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHE 140
+ ATS+V +T++++ I LVH +L +D L D F+WM I +HLLA Q+SV H+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHK 124
Query: 139 LASANSRC 116
L+ ++S C
Sbjct: 125 LSCSDSHC 132
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 73.3 bits (172), Expect = 8e-12
Identities = 38/106 (35%), Positives = 60/106 (56%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
NRLL+RK++ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 329 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 466
IY ++++ E KH +A+ E R+ RK+ + + K+ GT
Sbjct: 68 IYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGT 113
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 67.7 bits (158), Expect = 4e-10
Identities = 31/94 (32%), Positives = 53/94 (56%)
Frame = +2
Query: 125 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 304
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 305 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK 406
KS G+A Y D EP++ L R G+ EKK
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N+LLAR++++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 329 IYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 454
+Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 74 VYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +2
Query: 101 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 280
K+ E T I K+ N L+ R+++V + H GK T S+ IR + AK+Y V + V+V
Sbjct: 6 KIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVR 63
Query: 281 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKER 436
T +G G S IYD+++ AK+FEP + + R+ + + KE+
Sbjct: 64 EINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRNEYASQSYQLEQMMKEQ 115
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/102 (28%), Positives = 54/102 (52%)
Frame = +2
Query: 119 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 298
+++R + N+L+ R++++ ++ H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 299 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 424
G G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 54.8 bits (126), Expect = 3e-06
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N+++ RK++ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 329 IYDTLDLAKKFEPKHRLAR 385
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 54.0 bits (124), Expect = 5e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL RK++ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 329 IYDTLDLAKKFEPKHRLARH 388
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 53.2 bits (122), Expect = 9e-06
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = +2
Query: 113 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 292
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 293 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 454
+G G S +Y + A+ EP + R+ ++ + R + K R+ KK
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKK 149
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 53.2 bits (122), Expect = 9e-06
Identities = 29/85 (34%), Positives = 49/85 (57%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL R+++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 329 IYDTLDLAKKFEPKHRLARHGLYEK 403
IYDT++ +K E +H + R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 52.4 bits (120), Expect = 2e-05
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N L+ R+++V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 329 IYDTLDLAKKFEPKHRLARHG 391
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 50.4 bits (115), Expect = 6e-05
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N+L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 329 IYDTLDLAKKFEPKHRLARHGL 394
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/80 (30%), Positives = 44/80 (55%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL RK++ + L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 329 IYDTLDLAKKFEPKHRLARH 388
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 47.2 bits (107), Expect = 6e-04
Identities = 29/111 (26%), Positives = 56/111 (50%)
Frame = +2
Query: 101 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVF 280
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+V +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 281 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKE 433
T +G G S A IY+ ++FEP++ + R + K+ + +K+
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQ 119
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/90 (30%), Positives = 49/90 (54%)
Frame = +2
Query: 125 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 304
I+ K N LL R+++ V + G T S+ ++R KLA M +++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 305 GKSTGFALIYDTLDLAKKFEPKHRLARHGL 394
+S G+A +Y+ D K+ E ++ L R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 619 DPDMIRYIDEFGQTTTRMQ 675
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/86 (31%), Positives = 44/86 (51%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N+LL RK++ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 329 IYDTLDLAKKFEPKHRLARHGLYEKK 406
IYDT + A +EP + L R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 43.6 bits (98), Expect = 0.007
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N +L R + +V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 329 IYDTLDLAKKFEPKHRLARH 388
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 42.3 bits (95), Expect = 0.016
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 173 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 271
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 40.3 bits (90), Expect = 0.065
Identities = 26/79 (32%), Positives = 40/79 (50%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL+R+++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 329 IYDTLDLAKKFEPKHRLAR 385
IYD+ D KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 40.3 bits (90), Expect = 0.065
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 329 IYDTLDLAKKFEPKHRLARHGLYEK 403
+YD ++ K E +H L ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.086
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 317 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 445
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL RK++ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 329 IYDTLDLAKKFEPKH 373
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 38.3 bits (85), Expect = 0.26
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +2
Query: 149 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 328
N LL+R ++ + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 329 IYDTLDLAKKFEPKHRLAR 385
IYDT + K E + +AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.9 bits (74), Expect = 5.7
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = -1
Query: 330 IKANPVDLPPPKFVLKPNTNTTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNL 151
+ A V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N
Sbjct: 1 MSAFEVSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTN 60
Query: 150 LVMNLRVRIVAVP 112
+ ++V + VP
Sbjct: 61 KTL-VQVNLTRVP 72
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 322 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 471
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 33.5 bits (73), Expect = 7.5
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -3
Query: 256 NLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHEL-ASANSRCSFTHFELFSIIR 80
NL HF LLT +SW ++ ++R Q+V EL +SA S T F LFS++
Sbjct: 332 NLQHFS-LLTASNRPSNSYSWNGSLWQRFISRLQTVAAELKSSAIFTSSITTF-LFSLLF 389
Query: 79 RLHARXSAKTRA 44
+ R SA +R+
Sbjct: 390 QYFRRKSAASRS 401
>UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2;
Mule deer poxvirus|Rep: Putative uncharacterized protein
- Deerpox virus W-1170-84
Length = 129
Score = 33.1 bits (72), Expect = 9.9
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 200 KPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRL 379
KPT+ + ++ EKL K YK + F+ F T F +I D K+F K+
Sbjct: 37 KPTMDRIDLAEKLIKKYKDIRSLYFLLNI---FREMPDTEF-VIKQLSDYIKRFNRKYLE 92
Query: 380 ARHGLYEKKRPTRKQRKERKN 442
+ K +PT K++ +N
Sbjct: 93 QNDTTFGKTQPTIKRKHRFRN 113
>UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep:
CG8177-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1268
Score = 33.1 bits (72), Expect = 9.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 296 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 454
FGG K +L YD + E K R +RH Y +++ + + E KN++++
Sbjct: 133 FGGKKKIPPSLSYDEQPTDQSHERKRRRSRHQYYRQRKFSHQDSVEPKNKLEE 185
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 33.1 bits (72), Expect = 9.9
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 263 DVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 442
DV+F F +FG +S + I L++ + E H+L R K+ +++R+ N
Sbjct: 113 DVIFAFDEIVSFGYRESINLSQIKTCLEMESQEEKLHKLIRQ---NKENEEKERRRHIAN 169
Query: 443 RMKKVRGT 466
R+ K R T
Sbjct: 170 RLDKERVT 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,708,937
Number of Sequences: 1657284
Number of extensions: 13875118
Number of successful extensions: 36388
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 34682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36242
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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