Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F13
         (875 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.7  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    26   1.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 291  HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDKVPNSL 413
            H+   H +C +C +K      +  HC   H E  D+  N +
Sbjct: 918  HRPQSH-ECPVCGQKFTRRDNMKAHCKVKHPELRDRFYNHI 957


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +2

Query: 539 SCQEKSYSSIAGCRPFDSVTXDIAHTHGASATRXVSWTFSXESXDASIH 685
           S  E+S    A CR   S    + H H     R   W F+  +  + IH
Sbjct: 248 SYDEQSCIECAECRGLFSPQKFVCHQHEPQEIRTCHWGFNSSNWRSYIH 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,904
Number of Sequences: 2352
Number of extensions: 13712
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)