Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F09
         (899 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51549| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.9  
SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05)               28   8.9  

>SB_51549| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 630

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 546 FVGLGHDDQCEYHCNSYTGDIF*ANFRR 463
           F+G   +D C +H NS +G I   NF R
Sbjct: 524 FIGANEEDSCIFHTNSTSGSIRSPNFPR 551


>SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05)
          Length = 322

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 609 YVIWIVSMAPSSASTEPPADRFVGLGHDDQCEYHCNSYTGDI 484
           Y I I+   P+      P   F GLG D +CE  C S+  DI
Sbjct: 160 YTILILCYYPAILCIVKPVYLFFGLGVDKECE-SCYSFHDDI 200


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,959,504
Number of Sequences: 59808
Number of extensions: 351677
Number of successful extensions: 790
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)