Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F08
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726...   148   5e-36
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264...   147   1e-35
05_05_0256 - 23647736-23648947                                         29   6.6  
05_05_0250 + 23609594-23610784                                         29   6.6  

>07_01_0875 -
           7265529-7265588,7265681-7265746,7266008-7266293,
           7267138-7267142
          Length = 138

 Score =  148 bits (359), Expect = 5e-36
 Identities = 66/102 (64%), Positives = 81/102 (79%)
 Frame = +1

Query: 205 HGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 384
           H GLV GL  AAKA++K  A LCVLAE CD+  Y KLV+ALC EH + LV V + K LGE
Sbjct: 35  HDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGE 94

Query: 385 WAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
           WAGLCKID +GKARK+VGCSCVV+KDFGEE+  L++++DY+K
Sbjct: 95  WAGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNIVQDYVK 136


>07_01_0360 +
           2646279-2646283,2647113-2647398,2648043-2648108,
           2648199-2648258
          Length = 138

 Score =  147 bits (356), Expect = 1e-35
 Identities = 65/102 (63%), Positives = 81/102 (79%)
 Frame = +1

Query: 205 HGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 384
           H GLV GL  AAKA++K  A LCVLAE CD+  Y KLV+ALC EH + LV V + K LGE
Sbjct: 35  HDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGE 94

Query: 385 WAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
           WAGLCKID +GKARK+VGCSCVV+KD+GEE+  L++++DY+K
Sbjct: 95  WAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLNIVQDYVK 136


>05_05_0256 - 23647736-23648947
          Length = 403

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  PXVPSXRHXPWLLLQSRSPPTPSCRV 150
           P  P  R  PW+L+ S   PT SC V
Sbjct: 43  PAPPQQRPLPWILVPSSGGPTFSCAV 68


>05_05_0250 + 23609594-23610784
          Length = 396

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 73  PXVPSXRHXPWLLLQSRSPPTPSCRV 150
           P  P  R  PW+L+ S   PT SC V
Sbjct: 43  PAPPQQRPVPWILVPSAGGPTFSCAV 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,982,471
Number of Sequences: 37544
Number of extensions: 277005
Number of successful extensions: 737
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)