Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_F08
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 161 2e-39
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 161 2e-39
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 161 2e-39
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 161 2e-39
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 161 2e-39
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 153 8e-37
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 32 3.2
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 32 3.2
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 32 3.2
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 32 3.2
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 32 3.2
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 161 bits (392), Expect = 2e-39
Identities = 71/103 (68%), Positives = 85/103 (82%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCVLA CDE Y KLV+ALC EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 161 bits (392), Expect = 2e-39
Identities = 71/103 (68%), Positives = 85/103 (82%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCVLA CDE Y KLV+ALC EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 161 bits (392), Expect = 2e-39
Identities = 71/103 (68%), Positives = 85/103 (82%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCVLA CDE Y KLV+ALC EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 161 bits (392), Expect = 2e-39
Identities = 71/103 (68%), Positives = 85/103 (82%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCVLA CDE Y KLV+ALC EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 161 bits (392), Expect = 2e-39
Identities = 71/103 (68%), Positives = 85/103 (82%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCVLA CDE Y KLV+ALC EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 153 bits (371), Expect = 8e-37
Identities = 68/103 (66%), Positives = 82/103 (79%)
Frame = +1
Query: 202 IHGGLVHGLHAAAKALDKRQAVLCVLAEXCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 381
IH GL G+ AAKALDKRQA LCV A CDE Y KLV+AL EHQI L+KVD+NKKLG
Sbjct: 27 IHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLG 86
Query: 382 EWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 510
EW GLCKID++G RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 87 EWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 223 GLHAAAKAL--DKRQAVLCVLAEXCDE------AAYKKLVQALCNEHQIPLVKVDNNKKL 378
G++ AAK L D VLC+LA D+ + L+QA C E+ I +++V N +L
Sbjct: 39 GVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRL 98
Query: 379 GE 384
E
Sbjct: 99 AE 100
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 223 GLHAAAKAL--DKRQAVLCVLAEXCDE------AAYKKLVQALCNEHQIPLVKVDNNKKL 378
G++ AAK L D VLC+LA D+ + L+QA C E+ I +++V N +L
Sbjct: 39 GVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRL 98
Query: 379 GE 384
E
Sbjct: 99 AE 100
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 223 GLHAAAKAL--DKRQAVLCVLAEXCDE------AAYKKLVQALCNEHQIPLVKVDNNKKL 378
G++ AAK L D VLC+LA D+ + L+QA C E+ I +++V N +L
Sbjct: 39 GVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRL 98
Query: 379 GE 384
E
Sbjct: 99 AE 100
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 223 GLHAAAKAL--DKRQAVLCVLAEXCDE------AAYKKLVQALCNEHQIPLVKVDNNKKL 378
G++ AAK L D VLC+LA D+ + L+QA C E+ I +++V N +L
Sbjct: 39 GVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRL 98
Query: 379 GE 384
E
Sbjct: 99 AE 100
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 31.9 bits (69), Expect = 3.2
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +1
Query: 223 GLHAAAKAL--DKRQAVLCVLAEXCDE------AAYKKLVQALCNEHQIPLVKVDNNKKL 378
G++ AAK L D VLC+LA D+ + L+QA C E+ I +++V N +L
Sbjct: 39 GVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRL 98
Query: 379 GE 384
E
Sbjct: 99 AE 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,005,956
Number of Sequences: 237096
Number of extensions: 1616648
Number of successful extensions: 3194
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3191
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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