Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_F07
(892 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 254 2e-66
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 210 4e-53
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 187 4e-46
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 174 2e-42
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 164 2e-39
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 160 5e-38
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 147 3e-34
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 144 2e-33
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 142 1e-32
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 132 1e-29
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 130 5e-29
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 128 2e-28
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 118 2e-25
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 116 6e-25
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 109 7e-23
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 101 2e-20
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 99 2e-19
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 96 9e-19
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 95 2e-18
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 94 5e-18
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 93 9e-18
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 90 8e-17
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 89 1e-16
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 87 6e-16
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 86 1e-15
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 80 9e-14
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 79 1e-13
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 77 8e-13
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 76 1e-12
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 75 2e-12
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 74 4e-12
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 74 6e-12
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 69 2e-10
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 57 7e-07
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 56 2e-06
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 44 0.004
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 39 0.15
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 254 bits (622), Expect = 2e-66
Identities = 123/163 (75%), Positives = 136/163 (83%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+V + G RG LKR FKHLA+ + M R LKV +WFG+KK LAAVRTVCSH+ MIKGVT
Sbjct: 24 VVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVT 83
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
GFQYK RAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI
Sbjct: 84 FGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELI 143
Query: 499 IEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTVV 627
+EGN +E VS SAALIQQSTTV DI KFLDGLYVSEKTTVV
Sbjct: 144 VEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 210 bits (513), Expect = 4e-53
Identities = 103/163 (63%), Positives = 125/163 (76%), Gaps = 2/163 (1%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRL--LKVXQWFGSKKXLAAVRTVCSHVXXMIKGV 315
V VKGPRG L+R F H+ V + ++ + L+V +W+G++K LA VRT+CSHV MIKGV
Sbjct: 25 VIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKGV 84
Query: 316 TKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 495
T GF+YK R+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDEL
Sbjct: 85 TLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDEL 144
Query: 496 IIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTV 624
I+EGN +E VS+SAALIQQ+TTV DI KFLDG+YVSEK TV
Sbjct: 145 ILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 187 bits (455), Expect = 4e-46
Identities = 91/166 (54%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXP-RLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGV 315
+V V+GPRG L R FKHL + +++ R L+V WFG+++ +AA+RT SHV +I GV
Sbjct: 24 VVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGV 83
Query: 316 TKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 495
TKG++YK R VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL
Sbjct: 84 TKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDEL 143
Query: 496 IIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTVVLD 633
+++GN +E VS SAALI Q V DI KFLDG+YVS+K T+ D
Sbjct: 144 VLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 174 bits (424), Expect = 2e-42
Identities = 77/161 (47%), Positives = 109/161 (67%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V V GPRG L + F H +V I +V + L V WFG++K +A ++T+ S + MI GVTK
Sbjct: 43 VKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSIIENMITGVTK 102
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
G++YK R VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE+++
Sbjct: 103 GYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVL 162
Query: 502 EGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTV 624
GNSLE +S S A IQ + + D+ KFLDG+YVSE+ +
Sbjct: 163 TGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 164 bits (399), Expect = 2e-39
Identities = 83/161 (51%), Positives = 108/161 (67%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V V GPRG LK+ +H+ + ++ +K W GS+K A +R+V S + MI GVT+
Sbjct: 26 VTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVYSIINNMIIGVTQ 84
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
GF+YK R VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+I+
Sbjct: 85 GFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIL 144
Query: 502 EGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTV 624
EGNSLE+VS SAA I+Q V DI KFLDG+YVSE+ +
Sbjct: 145 EGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 160 bits (388), Expect = 5e-38
Identities = 85/167 (50%), Positives = 108/167 (64%), Gaps = 2/167 (1%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+V V GPRG L + KH+ V V +L+KV G +K +AA+RTV S V MI GVT
Sbjct: 24 IVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVT 83
Query: 319 KGFQYKXRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 492
KG++YK R VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KDE
Sbjct: 84 KGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDE 143
Query: 493 LIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTVVLD 633
+++ GNS+EDVS +AA +QQ V DI KFLDG+YVS K + D
Sbjct: 144 IVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 147 bits (357), Expect = 3e-34
Identities = 75/159 (47%), Positives = 94/159 (59%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+V VKG +G L R F H + I + V WF K A RT+CSH+ M KGVT
Sbjct: 23 VVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPRTICSHIENMFKGVT 81
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
GF+YK R YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDELI
Sbjct: 82 YGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELI 141
Query: 499 IEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+ G S+EDVS +AA I +S V D+ KFLDG YVS +
Sbjct: 142 LRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 144 bits (350), Expect = 2e-33
Identities = 78/183 (42%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Frame = +1
Query: 112 GLRSXCXRVLVPVKGPRGVLKRXFKHLAVXI---RMVXPR------LLKVXQWFGSKKXL 264
G+ R + V GPRG L R F+H V I ++V + ++ + W+G+++
Sbjct: 16 GVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRRDS 75
Query: 265 AAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 444
A VRT+ SH+ MI GVTKG+QYK R VYAHFP+ V + I+++NFLGEK R ++
Sbjct: 76 AVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIE 135
Query: 445 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTV 624
M GV V KDE+ +EGN +E VS SAA I + V DI +FLDG+YVSEK +
Sbjct: 136 MYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKCLI 193
Query: 625 VLD 633
D
Sbjct: 194 END 196
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 142 bits (343), Expect = 1e-32
Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Frame = +1
Query: 166 VLKRXFKHLAVXIRMVXP---RLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQYK 336
V ++ KH+ + R++ + +K W +K A +RT + V MIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 337 XRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 516
RAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 517 EDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTVV 627
+ VS SAAL+ +T V DI KFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 132 bits (319), Expect = 1e-29
Identities = 59/103 (57%), Positives = 75/103 (72%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+V V GPRG LKR F+HL + + V L+V +WFG +K +AA+RTVCSH+ MIKGVT
Sbjct: 24 VVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVT 83
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 447
KGF+YK R+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 84 KGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 130 bits (314), Expect = 5e-29
Identities = 71/169 (42%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRM---------VXPRLLKVXQWFGSKKXLAAVRTVCSH 291
+V VKGPRG L + F+H A+ I++ V + V W +K V +V S
Sbjct: 24 VVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRKQRCQVNSVASQ 83
Query: 292 VXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV- 468
+ MI+GVT G+++K YAHFPI +EI+NFLGEK IR +K PGVT+
Sbjct: 84 IRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITR 143
Query: 469 NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
N ++K+ L ++GN L +VS + ALI Q+ V DI +FLDG+YVSEK
Sbjct: 144 NEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 128 bits (308), Expect = 2e-28
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRL-LKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+ G G + R F+ + IR + + + W KK LA + T+ SH+ MI GV+
Sbjct: 25 ISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTIASHITNMIVGVS 84
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
GF+Y + +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+
Sbjct: 85 LGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEIS 144
Query: 499 IEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+ G+ L VS +AA IQQS D+ KFLDG+Y+ K
Sbjct: 145 VFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 118 bits (285), Expect = 2e-25
Identities = 67/158 (42%), Positives = 98/158 (62%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V VKGP+G L+R K+ V I +++ + + F KK +A VRT +H+ MIKGVT+
Sbjct: 26 VKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFKAHINNMIKGVTE 84
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
GF+Y+ + VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+ +
Sbjct: 85 GFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEIEV 139
Query: 502 EGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
EG E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 140 EGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 116 bits (280), Expect = 6e-25
Identities = 67/158 (42%), Positives = 96/158 (60%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V VKGP+G L+R F + I ++ + + F +K +A RT +H+ MIKGVT+
Sbjct: 26 VKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFAAHIRNMIKGVTE 84
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
GF YK + VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+I+
Sbjct: 85 GFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEIIV 139
Query: 502 EGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
EG E V +AA I+Q+T + D F DG+Y+ EK
Sbjct: 140 EGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 109 bits (263), Expect = 7e-23
Identities = 64/123 (52%), Positives = 77/123 (62%)
Frame = +1
Query: 256 KXLAAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 435
K LA VRT+CSHV MIKGV+ GF+YK R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 436 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+M GV S QKDELI+EGN E VS+SAALIQ++T V DI KF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 616 TTV 624
T+
Sbjct: 128 GTM 130
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 101 bits (242), Expect = 2e-20
Identities = 53/130 (40%), Positives = 74/130 (56%)
Frame = +1
Query: 226 LKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEI 405
+++ W G +K +A TV S + IK VT GF Y +AVY HF IN E I+ +
Sbjct: 72 IRIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLV 131
Query: 406 RNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXK 585
+NFLGEK ++R +M G V ++KD ++IEG SL DVS SA I D
Sbjct: 132 KNFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRV 190
Query: 586 FLDGLYVSEK 615
FLDG++V+E+
Sbjct: 191 FLDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 98.7 bits (235), Expect = 2e-19
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 241 WFGSKKXLAAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLG 420
WFG++K LA + T+ V MI GVT G++YK VY+HFPI +E + F+G
Sbjct: 66 WFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMG 125
Query: 421 EKYIRRVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDG 597
K + V GV + N KDE+ IEG +LEDVS I Q T + D+ KFLDG
Sbjct: 126 HKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDG 185
Query: 598 LYV 606
+YV
Sbjct: 186 IYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 96.3 bits (229), Expect = 9e-19
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXP-RLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+ V G G L+R F+H+ V +++V R + V WFG K A +RTVCSH+ MI GV
Sbjct: 87 IVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRTVCSHIENMITGVR 146
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFL 417
+ +QYK R VYAHFPIN T S IEIRNFL
Sbjct: 147 QRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 95.5 bits (227), Expect = 2e-18
Identities = 60/169 (35%), Positives = 91/169 (53%)
Frame = +1
Query: 109 PGLRSXCXRVLVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCS 288
PG+ ++ V GP+G L R + + + MV + V K+ LA T+ +
Sbjct: 11 PGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLEA 69
Query: 289 HVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV 468
H MI+GV G++Y+ + VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 70 HAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTVK 127
Query: 469 NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
DE+ I G E V ++AA I+ +T + D F DG+Y++E+
Sbjct: 128 IG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 93.9 bits (223), Expect = 5e-18
Identities = 56/154 (36%), Positives = 83/154 (53%)
Frame = +1
Query: 154 GPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQY 333
GP+G R K+ V I V ++V KK A V T H+ +I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIE-VGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 334 KXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 513
+ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 514 LEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+E+ +AA ++Q+T + D F DG+Y+ +K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 93.1 bits (221), Expect = 9e-18
Identities = 48/166 (28%), Positives = 97/166 (58%), Gaps = 1/166 (0%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHL-AVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGV 315
++ VKGP+G + + F + + I++ +++ + F ++ A + ++ +H+ MI G
Sbjct: 27 VLKVKGPKGEVIKDFSYAKGIRIQLNEGKII-LETTFADRRKKALLYSIIAHIKNMITGT 85
Query: 316 TKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 495
G++Y + + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +++
Sbjct: 86 INGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGEDI 140
Query: 496 IIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEKTTVVLD 633
++EG+ + +V+ +AA I+ ST + D F DG+Y+ +K + L+
Sbjct: 141 VVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 89.8 bits (213), Expect = 8e-17
Identities = 57/155 (36%), Positives = 87/155 (56%)
Frame = +1
Query: 151 KGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQ 330
KGP+G ++R F + + I + ++ V K+ A V T SH+ +I GV++GF+
Sbjct: 27 KGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFASHLKNLIIGVSEGFE 85
Query: 331 YKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 510
K VYAHFP+ V EG +++ I NFLGEK R K+ G T V +E+++ G
Sbjct: 86 CKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK--VSGNEIVVSGI 140
Query: 511 SLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+ EDV +AA I+Q T + D F DG+Y+ +K
Sbjct: 141 NKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 89.0 bits (211), Expect = 1e-16
Identities = 56/159 (35%), Positives = 89/159 (55%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
++ VKG G + F+ + V IR+ ++ + K+ LA + T S V + +GV
Sbjct: 9 MLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT-RKRDLAILNTARSIVRNLCEGVG 67
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
G+ K + VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I
Sbjct: 68 VGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVI 122
Query: 499 IEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+ G+ L DVS +AA ++Q T V D FLDG+YV EK
Sbjct: 123 VTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 87.0 bits (206), Expect = 6e-16
Identities = 54/139 (38%), Positives = 80/139 (57%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V V+GP G +++ F H V + V + +KK A V T+ S + MI GVTK
Sbjct: 25 VEVEGPLGKVEKDFSHARRISIRVEGNSVVVETFHATKKDYALVGTIASIINNMIIGVTK 84
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
G++YK + VYAHFP++ + E + II I NFLGE+ R + PG V +KD++I+
Sbjct: 85 GYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDVIV 139
Query: 502 EGNSLEDVSSSAALIQQST 558
EG L+ V+ +AA I +T
Sbjct: 140 EGIDLDAVAQTAANIHLAT 158
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 85.8 bits (203), Expect = 1e-15
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Frame = +1
Query: 151 KGPRGVLKRXF--KHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKG 324
KG G L + F K++ + + L V ++ +K A VRT+ S + MI GV+KG
Sbjct: 28 KGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRTITSIIYNMIIGVSKG 87
Query: 325 FQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 504
F Y + VY+HFPI+ + + +EI N G K I + V V + K E+I+
Sbjct: 88 FTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILL 147
Query: 505 GNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
+E + ++LIQ ++ D F+DG+Y++ K
Sbjct: 148 SKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 79.8 bits (188), Expect = 9e-14
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 5/164 (3%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
++ V GP+G ++R F H + + + +++ + +F +++ + T SH+ M++GV
Sbjct: 24 ILKVSGPKGEVERKFYHPLIKLSVNDNKII-LETYFATRREKRLINTWRSHIKNMLEGVQ 82
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VNSPKQKD 489
F Y+ + Y HFP+ V EGN +I + NFLGEK I+ + V V + K +
Sbjct: 83 NPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQNKDET 140
Query: 490 ELIIEGNSLEDVSSSAALIQQSTTV--XXXDIXKFLDGLYVSEK 615
E+++E E A++I+QST D +F DG+++ K
Sbjct: 141 EIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 79.4 bits (187), Expect = 1e-13
Identities = 45/120 (37%), Positives = 68/120 (56%)
Frame = +1
Query: 256 KXLAAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 435
K ++ + T SH+ M GVT+G++Y Y+HFP+ V EG+ ++ I NFLGEK R
Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPR 115
Query: 436 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
R + G T V +EL + G +E V +AA I+Q T + D+ F DG+Y++ K
Sbjct: 116 RTTI-HGDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 76.6 bits (180), Expect = 8e-13
Identities = 47/140 (33%), Positives = 79/140 (56%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVT 318
+V VKGP G + + FK+ V + + +++ + + K+ A + T + M GVT
Sbjct: 29 IVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAILGTYKGILKNMFLGVT 87
Query: 319 KGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
+G++YK + +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++
Sbjct: 88 RGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIV 143
Query: 499 IEGNSLEDVSSSAALIQQST 558
IEG E VS+ AA +Q +T
Sbjct: 144 IEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 76.2 bits (179), Expect = 1e-12
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +1
Query: 133 RVLVPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKG 312
R V VKGP+G + + F + V + + ++ + +++ A + + +++ M KG
Sbjct: 40 RYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKG 98
Query: 313 VTKGFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKD 489
VT+G +YK + VY+HFP + + I NF+GE R ++ P T V Q
Sbjct: 99 VTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQ 156
Query: 490 ELIIEGNSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
++I+ G E V +AA ++Q+T + D F DG+Y+ EK
Sbjct: 157 DIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 75.4 bits (177), Expect = 2e-12
Identities = 49/155 (31%), Positives = 82/155 (52%)
Frame = +1
Query: 151 KGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQ 330
+GP G + F+++ V I + ++ + K+ A + T S + + +G+ +G+
Sbjct: 31 EGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTARSIIRNICEGLVEGYT 89
Query: 331 YKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 510
K + V+AHFPI V EG I+ I NF GE+ R + V+ PK +D +++ G
Sbjct: 90 IKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VLLTGE 144
Query: 511 SLEDVSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
D++ +AA I+ +T V D FLDG+YV EK
Sbjct: 145 VWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/136 (31%), Positives = 76/136 (55%)
Frame = +1
Query: 208 MVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQYKXRAVYAHFPINCVTTEG 387
+V +K+ + + + V T S + M+KG+ +GFQY+ + Y+HFP+ V+ +G
Sbjct: 46 LVEDNKIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKG 104
Query: 388 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVX 567
+++ I NF GE+ R ++ G T V+ + D L + G S +DV +AA I+++T +
Sbjct: 105 KTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIK 160
Query: 568 XXDIXKFLDGLYVSEK 615
D F DG+Y+ K
Sbjct: 161 GFDPRVFQDGIYLISK 176
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 73.7 bits (173), Expect = 6e-12
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Frame = +1
Query: 169 LKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGFQYKXRAV 348
L R F+H + +R L +V KK A T +H+ M +GV GF+YK +AV
Sbjct: 35 LTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWAAHLTNMARGVDSGFEYKLKAV 93
Query: 349 YAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GVTVVNSPKQKDELIIEGNSLED 522
Y+HFP+ + GN + + N GEK + RV P V + K ++ + G E
Sbjct: 94 YSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQNKTDVTVSGADREK 150
Query: 523 VSSSAALIQQSTTVXXXDIXKFLDGLYVSEK 615
V +AA I++S + D F DG+Y+ K
Sbjct: 151 VGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 68.5 bits (160), Expect = 2e-10
Identities = 46/153 (30%), Positives = 74/153 (48%)
Frame = +1
Query: 148 VKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTKGF 327
+KG G R F+ V + +K+ +K V T S +I+GVTKGF
Sbjct: 27 IKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGF 85
Query: 328 QYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEG 507
+Y + + HFP+ V+ G+ +I + NFLGEK R K+ G V + D + I G
Sbjct: 86 EYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGDRITING 140
Query: 508 NSLEDVSSSAALIQQSTTVXXXDIXKFLDGLYV 606
+ +AA I+++T + D F DG+++
Sbjct: 141 IDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 56.8 bits (131), Expect = 7e-07
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLK--VXQWFGSKKXLAAVRTVCSHVXXMIKGV 315
V VKGP+G L R F H+ V + ++ +L K V +W+G++K LA V T+CS V IK V
Sbjct: 25 VIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHTICSPVQNTIKWV 84
Query: 316 TKG 324
T G
Sbjct: 85 TLG 87
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 56.4 bits (130), Expect = 9e-07
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = -2
Query: 627 HNSCFLRYIKTIQELSDIXXLDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 448
+N R I TIQE +DI D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 447 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTXLVLEAFS 316
S+ F TQE++ N +T+ + VN E+ I+ + LV FS
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFS 126
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 55.6 bits (128), Expect = 2e-06
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +1
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI 498
GF Y+ R+VYA FP N + E S+IE + +G+KYI RV++ V S QK+EL+
Sbjct: 33 GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 44.4 bits (100), Expect = 0.004
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +1
Query: 139 LVPVKGPRGVLKRXFKHLAVXIRMVXPRL--LKVXQWFGSKKXLAAVRTVCSHVXXMIKG 312
+V VK RG L+R F H+ + +R++ R L+V +W + K LA T+ SHV MIK
Sbjct: 18 IVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMIKR 76
Query: 313 V 315
V
Sbjct: 77 V 77
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 39.1 bits (87), Expect = 0.15
Identities = 37/136 (27%), Positives = 63/136 (46%)
Frame = +1
Query: 142 VPVKGPRGVLKRXFKHLAVXIRMVXPRLLKVXQWFGSKKXLAAVRTVCSHVXXMIKGVTK 321
V VKGP+G L R F H + I+ V +L V + K+ A T S + M++GV+K
Sbjct: 25 VAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSK 82
Query: 322 GFQYKXRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 501
GF+ V + + GN ++ L Y V++ P + + ++++
Sbjct: 83 GFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEGIEIEVPSQTKVVV 134
Query: 502 EGNSLEDVSSSAALIQ 549
+G E V + AA I+
Sbjct: 135 KGTDKERVGAIAANIR 150
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 7.4
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -2
Query: 627 HNSCFLRYIKTIQELSDIXXLDCSRLLNESSRARDIFQR 511
+N+C LR IK + L+ + L+ SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRL--LEESRLTNSLSRLRDVFKK 61
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,770,312
Number of Sequences: 1657284
Number of extensions: 8487787
Number of successful extensions: 15407
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 15132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15375
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -