Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_F04
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 98 1e-20
01_06_0663 - 30991390-30992340 86 3e-17
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 66 3e-11
05_07_0134 - 27911920-27912762 66 5e-11
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 57 2e-08
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 53 4e-07
06_01_0080 + 644021-645463 38 0.014
06_03_0219 - 18227559-18227858,18227864-18228340 34 0.18
02_01_0384 - 2781362-2782299,2782320-2782428 33 0.41
04_01_0035 - 433848-434372,434905-435381 31 1.7
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.8
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.7
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 8.8
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 8.8
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 97.9 bits (233), Expect = 1e-20
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Frame = +3
Query: 228 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 407
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 408 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 551
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 552 GVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAXLTNNMLMGITGM 731
GV A+ L FM GG +E + + PLL MG K +CG G+G VA + NNM M I+ +
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 732 ATAXCMNMGHXNGTR 776
+ +G G +
Sbjct: 181 GVSEAFALGQNLGIK 195
>01_06_0663 - 30991390-30992340
Length = 316
Score = 86.2 bits (204), Expect = 3e-17
Identities = 64/204 (31%), Positives = 90/204 (44%), Gaps = 1/204 (0%)
Frame = +3
Query: 162 RAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXX 341
R S +T + VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 13 RPISPDTTR-VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRA 71
Query: 342 XXXXXXXXXSILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEK 518
++ V L G +A G LL+D +T DP + +I A K
Sbjct: 72 AAAAADVIFLMVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAK 131
Query: 519 GLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAXL 698
DAPVSGG GA++ATL+ AGG R PL K+MG + G G+GQ A L
Sbjct: 132 SCAAVDAPVSGGDRGARSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKL 190
Query: 699 TNNMLMGITGMATAXCMNMGHXNG 770
N + + T + M H G
Sbjct: 191 GNQIAIASTMVGLVEGMVYAHKAG 214
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 66.5 bits (155), Expect = 3e-11
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Frame = +3
Query: 132 STQCLYTAARRA----YSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNA 299
++Q +Y A++ A + T K + F+GLG MG MA++L+K GF+V YD K L
Sbjct: 302 ASQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLAR 361
Query: 300 AAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTID 476
G +S I+ +N+V + V G G V+ G+ +I SST+
Sbjct: 362 FTDLGGLTKDS-PEEVSKDVEILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVS 420
Query: 477 PN-VPKQIFPIALE-KGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGA 650
P V K + E + + DAPVSGGV A TL +K + S+ + +
Sbjct: 421 PGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSE 478
Query: 651 KQFHC-GQIGSGQVAXLTNNMLMGITGMATAXCMNMGHXNGTRT 779
K + G G+ + N +L G+ + A M G RT
Sbjct: 479 KLYVIKGGCGAASSVKMVNQLLAGVHIASAAEAMAFGARLNLRT 522
>05_07_0134 - 27911920-27912762
Length = 280
Score = 65.7 bits (153), Expect = 5e-11
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Frame = +3
Query: 228 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 407
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 408 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 584
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 585 FMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAXLTNNM 710
+AGG + PL +G + + G GSGQ + + N +
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQI 161
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +3
Query: 513 EKGLGFTDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVA 692
+KG F +APVSG A++ L +A G K ++ +P V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 693 XLTNNMLMGITGMATAXCMNMGHXNG 770
L NM+MG A + +++ +G
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSG 195
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 192 VAFLGLGNMGGFMAANLVKKGFTV 263
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 384 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 476
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 52.8 bits (121), Expect = 4e-07
Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 2/225 (0%)
Frame = +3
Query: 51 SLLCARAHGRTLN*EKNKFKMAARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMGGFM 230
SLLCARA AR + S C +++ + V FLGLG MG M
Sbjct: 8 SLLCARAAAAAPTLRLRGGGRGARLVFS--CSASSSSPSGEGGFSGKVGFLGLGIMGAPM 65
Query: 231 AANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYL 410
A+NL+ G V ++ ++ + G S ++L + ++V
Sbjct: 66 ASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVAC 125
Query: 411 GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVSGGVMGAQNATLAF 587
G +G G +D ST+D K I G F + S +G F
Sbjct: 126 GANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFSSCTVGPMLTRYLF 185
Query: 588 -MAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAXLTNNMLMG 719
+ + ++ + + +F G +G G L NM+MG
Sbjct: 186 SRLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMG 230
>06_01_0080 + 644021-645463
Length = 480
Score = 37.5 bits (83), Expect = 0.014
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 14/186 (7%)
Frame = +3
Query: 192 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXX 368
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 369 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 530
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 531 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLP-LLKV------MGAKQFHCGQIGSGQV 689
VSGG GA+N + M GG E ++ LLKV G + G+ GSG
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNF 184
Query: 690 AXLTNN 707
+ +N
Sbjct: 185 VKMVHN 190
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 33.9 bits (74), Expect = 0.18
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -3
Query: 733 AIPVMPINMLLVXLATCPEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMT 554
++PV+PI+ L V L + P P C A T+RR S PP R+A P
Sbjct: 56 SLPVVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRR 113
Query: 553 PPDTGASVNPSPFS 512
PP+ PS FS
Sbjct: 114 PPELPPRRRPSRFS 127
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 32.7 bits (71), Expect = 0.41
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -3
Query: 682 PEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSKAI 503
P P++ +T R LS ++ PA +R P +PP GAS P S A
Sbjct: 185 PPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRRSSSAA 244
Query: 502 GKICLGTFG 476
C G G
Sbjct: 245 SPSCAGVEG 253
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 153 AARRAY---SSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 323
AAR Y S + K+V +GLG++G +A L G T+ Y+ S+ ++ + N
Sbjct: 149 AARGDYPLGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPD 206
Query: 324 ANSIXXXXXXXXXXXSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 473
+ ++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 207 VTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 228 MAANLVKKGFTVRGYDPSKDALN 296
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 441 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 322
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 192 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 320
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -3
Query: 664 QWNCLAPITLRRG-RDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSKA 506
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,572,025
Number of Sequences: 37544
Number of extensions: 594684
Number of successful extensions: 1689
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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