Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F02
         (941 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0746 + 27726736-27727118,27727518-27727544,27728042-277281...    31   1.8  
11_06_0201 + 21178784-21179047,21179519-21180064                       30   2.3  
07_03_1715 + 28950718-28950876,28950969-28951091,28951121-289515...    29   7.1  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    28   9.4  
01_06_0146 + 26969011-26969995,26970878-26970930                       28   9.4  

>04_04_0746 +
           27726736-27727118,27727518-27727544,27728042-27728126,
           27729252-27729809
          Length = 350

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 267 FRSRVACACLCAQARRPPELVLAPPGPKT 181
           F +  AC C C +   PP   L PP P T
Sbjct: 17  FTTANACGCACGKCPTPPPPALPPPPPPT 45


>11_06_0201 + 21178784-21179047,21179519-21180064
          Length = 269

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +2

Query: 122 RRRSFMP-PAAX---SPVRLSGTSVXGPGGASTNSGGRLAWAHKHAQA 253
           RRRS    PAA    SP  L  T + GPGG   +  G LA A   A A
Sbjct: 65  RRRSVAEFPAAEAVSSPAELPATQLLGPGGGGVSPRGWLALARTRAPA 112


>07_03_1715 +
           28950718-28950876,28950969-28951091,28951121-28951594,
           28951673-28951795,28951886-28952131
          Length = 374

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 439 C*GDHQSWRISAWSPTSGS 383
           C GD+QSW+I  W P + S
Sbjct: 184 CKGDNQSWKILPWGPEAHS 202


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 225 RRPPELVLAPPGPKTLVP 172
           R PP + L PPGP  LVP
Sbjct: 229 RLPPGITLPPPGPMELVP 246


>01_06_0146 + 26969011-26969995,26970878-26970930
          Length = 345

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 201 APPGPKTLVPESLTGEXAAGGMKERRRXETSGDPE 97
           APP P   +P S     +   M ER   E  G+PE
Sbjct: 113 APPSPPPSLPPSPPAPGSPESMLEREASEADGEPE 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,128,512
Number of Sequences: 37544
Number of extensions: 280907
Number of successful extensions: 881
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)