Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F02
         (941 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)               30   2.4  
SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4)                      29   5.5  

>SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 893

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 303 QAPVCGXWIXTPTFLPVVWSRRXSVTKEPDVGLQAEI 413
           Q PVC  ++   +F P+V  R    T+ P+ G+++ +
Sbjct: 644 QTPVCMIFVIVSSFQPIVHPRGPRATRRPEEGVRSPV 680


>SB_32997| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 553

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 363 RRXSVTKEPDVGLQAEIRHDW*SPQHLYNNLLPNMSKFVP 482
           RR S++   D  LQ++  H W +   +  NLL N+ K  P
Sbjct: 416 RRFSLSDHADTDLQSKCPHYWFAVASVLENLLKNIKKDFP 455


>SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4)
          Length = 712

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 222 RPPELVLAPPGPKTLVPESLTGEXAAGGMKER--RRXETSGDPETT 91
           +PP+  L PP P   +P+SLT E      +E+     ET+  P  T
Sbjct: 654 QPPQERLMPPSPPQGLPQSLTSETPREAQQEQPPATQETASAPVVT 699


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,298,621
Number of Sequences: 59808
Number of extensions: 299100
Number of successful extensions: 853
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2752873431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)