Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_F01
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834     29   5.0  
07_01_0296 - 2148396-2148407,2148523-2148749,2148803-2148858,214...    29   6.6  
08_02_0363 + 16238710-16240224,16240537-16240545                       28   8.8  

>04_03_0625 + 18126856-18127444,18127561-18127725,18127827-18127834
          Length = 253

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +2

Query: 548 GLMNDDDCAKSFPFICKKTLASLEWNVNCDIPNTDYAYSDVLGRCYKMYLTP 703
           G  + D+C +   + C  T  ++  +  C  P      + + G C K +LTP
Sbjct: 194 GCQDIDECEEHENYHCYGTCKNILGSFECSCPAGTRGNASIEGACQKNFLTP 245


>07_01_0296 -
           2148396-2148407,2148523-2148749,2148803-2148858,
           2149927-2149931
          Length = 99

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -3

Query: 832 PSHLSXGANLVMFTKVVSLFLGIYDR*VRLISTAHPVCFGPGHRGQIHLVASAK 671
           PS  S G +L M    +SLFL IY   +  +   H + FGP + G +  +A  K
Sbjct: 35  PSFQSMGLDLRMS---LSLFLNIYISSLIFLIVFHVIFFGPWYPGLVSRMAEEK 85


>08_02_0363 + 16238710-16240224,16240537-16240545
          Length = 507

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
 Frame = +2

Query: 545 DGLM-NDDDCAKSFPFICKKTLASLEWNVNCDIPNTDYAYSDVLGRCYKMYLTPMTWS-- 715
           D LM ND+DCA  F  +C         N N D P+ +Y   + +    +    P  W+  
Sbjct: 413 DHLMRNDEDCATKFAALCDGV------NFNLDDPSRNYLQKECVALDQRYRSRPSQWTAW 466

Query: 716 ----EAYRVCSADQSYLAII 763
                    C A  S LAII
Sbjct: 467 MLREHCRNPCVAVASVLAII 486


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,093,078
Number of Sequences: 37544
Number of extensions: 471007
Number of successful extensions: 1079
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)