Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E20
         (888 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for ...   204   3e-52
BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32 p...   204   3e-52
BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32 p...   204   3e-52
AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32 p...   204   3e-52
BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.       114   5e-25
BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.      34   0.79 
BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.      32   3.2  

>X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for
           ribosomal protein L32. ).
          Length = 135

 Score =  204 bits (499), Expect = 3e-52
 Identities = 95/130 (73%), Positives = 107/130 (82%)
 Frame = +3

Query: 120 PVXRPTIVKKRPQRFXXHQSXRXAKLKRXWRKPXGXDNXVRRRFKGQYLMPNIGYGSNKK 299
           P+ +P IVKKR ++F  HQS R  K+KR WRKP G DN VRRRFKGQ LMPNIGYGSNKK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 300 XRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 479
            +HMLP+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 480 XARLRSQENE 509
            ARLRS+ENE
Sbjct: 126 NARLRSEENE 135


>BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  204 bits (499), Expect = 3e-52
 Identities = 95/130 (73%), Positives = 107/130 (82%)
 Frame = +3

Query: 120 PVXRPTIVKKRPQRFXXHQSXRXAKLKRXWRKPXGXDNXVRRRFKGQYLMPNIGYGSNKK 299
           P+ +P IVKKR ++F  HQS R  K+KR WRKP G DN VRRRFKGQ LMPNIGYGSNKK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 300 XRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 479
            +HMLP+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 480 XARLRSQENE 509
            ARLRS+ENE
Sbjct: 126 NARLRSEENE 135


>BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  204 bits (499), Expect = 3e-52
 Identities = 95/130 (73%), Positives = 107/130 (82%)
 Frame = +3

Query: 120 PVXRPTIVKKRPQRFXXHQSXRXAKLKRXWRKPXGXDNXVRRRFKGQYLMPNIGYGSNKK 299
           P+ +P IVKKR ++F  HQS R  K+KR WRKP G DN VRRRFKGQ LMPNIGYGSNKK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 300 XRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 479
            +HMLP+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 480 XARLRSQENE 509
            ARLRS+ENE
Sbjct: 126 NARLRSEENE 135


>AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  204 bits (499), Expect = 3e-52
 Identities = 95/130 (73%), Positives = 107/130 (82%)
 Frame = +3

Query: 120 PVXRPTIVKKRPQRFXXHQSXRXAKLKRXWRKPXGXDNXVRRRFKGQYLMPNIGYGSNKK 299
           P+ +P IVKKR ++F  HQS R  K+KR WRKP G DN VRRRFKGQ LMPNIGYGSNKK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 300 XRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 479
            +HMLP+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRVTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 480 XARLRSQENE 509
            ARLRS+ENE
Sbjct: 126 NARLRSEENE 135


>BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.
          Length = 107

 Score =  114 bits (274), Expect = 5e-25
 Identities = 53/81 (65%), Positives = 63/81 (77%)
 Frame = +3

Query: 267 MPNIGYGSNKKXRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVER 446
           MPNIGYG NKK +H+LP+GF K LVHNVKELE+L++ N+ YC EI H VSSK  K I+ER
Sbjct: 27  MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILER 86

Query: 447 AQQLSIRVTNAXARLRSQENE 509
           A Q+ IRVTNA A L S E+E
Sbjct: 87  AAQVVIRVTNANASLHSAESE 107


>BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.
          Length = 33

 Score = 33.9 bits (74), Expect = 0.79
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 129 RPTIVKKRPQRFXXHQSXRXAKLKR 203
           +P IVKKR ++F  HQS R  K+KR
Sbjct: 9   KPKIVKKRTKKFIRHQSDRYVKIKR 33


>BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.
          Length = 82

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 129 RPTIVKKRPQRFXXHQSXRXAKLK 200
           +P IVKKR ++F  HQS R  K+K
Sbjct: 9   KPKIVKKRTKKFIRHQSDRYVKIK 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,683,211
Number of Sequences: 237096
Number of extensions: 1343033
Number of successful extensions: 7170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7170
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)