Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E19
         (900 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.96 
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)                31   1.3  
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)              31   1.3  
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)                  31   1.7  
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)                     29   3.9  
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)            29   5.1  
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)                  29   5.1  
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)                 29   5.1  
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.8  
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.8  
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.8  
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)                   29   6.8  
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.9  
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)                   28   8.9  
SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.9  

>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLV 305
           T+   AT  + T  T++I   TTT+  T T ++TT+  T T     +T+++  +++
Sbjct: 12  TIITNATTTIITLSTTIITT-TTTITTTTTTITTTITPTITTTTTIITTTITTTII 66


>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
          Length = 839

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 168 TTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSS 287
           T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 135 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTV 263
           P L+ T+    T A  S + P+TT   ET     TTV    TV
Sbjct: 326 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 368


>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
          Length = 3094

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 168  TTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSS 287
            T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 168 TTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSS 287
           T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 776 TDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 135  PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTV 263
            P L+ T+    T A  S + P+TT   ET     TTV    TV
Sbjct: 2022 PALETTSAPESTAATESTVAPETTVSQETTVAPETTVPTETTV 2064


>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
          Length = 266

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/53 (28%), Positives = 33/53 (62%)
 Frame = +3

Query: 156 TNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLVLAV 314
           TN++TT+ T++I   T T+  T T ++ T+ IT T+    +T ++ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218


>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1141

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 150 TATNLLTTARTSLILPKTTTL-METATNLSTTVXITWTVPKADLTSSLPLSLVLAVGSXE 326
           T  +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +  LA  + E
Sbjct: 566 TTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEA-TTASLATTASLATTAPE 624



 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 150 TATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSL 290
           T  +L+TTA  +   P+TTT  E  T   TT     T      T+SL
Sbjct: 139 TTASLVTTAPEATTAPETTTAPEATTAPETTTASLVTTAPETTTASL 185



 Score = 29.1 bits (62), Expect = 5.1
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +3

Query: 138 TLKETAT-NLLTTARTSLILPKTTTL-METATNLSTTVXITWTVPKADLTSSLPLSLVLA 311
           T  ET T +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +   A
Sbjct: 519 TAPETTTASLATTAPETTTAPETTTASLATTAPETTTASLVTTAPEA-TTASLATTAPEA 577

Query: 312 VGSXEYLRKLI 344
             + E    L+
Sbjct: 578 TTAPETTTALL 588


>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 286

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 153 ATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTS 284
           AT  +TT   ++  P  TT   TAT  +TT   T T P A  T+
Sbjct: 96  ATATITTYTATVTAPNATTTTPTATTTTTTTTTT-TTPYATTTT 138



 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTS 284
           T   TA N  TT  T+     TTT   T    +TT   T T P    TS
Sbjct: 104 TATVTAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTS 152


>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
          Length = 1165

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +3

Query: 150 TATNLLTTARTSLILPKTTTLMETA--TNLSTTVXITWTVPKADLTSSLPLSLVLAVGSX 323
           T T  L    T L L   TTL+     T +   V IT T+P   +T++LPL ++  +   
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTILPL 600

Query: 324 EYLRKLITK*CINXI 368
             +  ++    IN I
Sbjct: 601 VAINTILPLVAINTI 615


>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
          Length = 678

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 150 TATNLLTTART-SLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLVLAV 314
           T  +L+T   T  L++  T  L+   T +   V IT T+P   +T+ LPL ++  +
Sbjct: 278 TILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVITTI 333


>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
          Length = 122

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLVLAV 314
           T+  T T ++TT  T++ +  TT +    T + TTV I  T+    + +++  +++  +
Sbjct: 21  TMITTITVIITTMITTITITTTTIITTMITTIITTVIIIITITIITIITTIITTIITTI 79


>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
          Length = 249

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 162 LLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLVLA 311
           +++T  T+     TTT+  T T  +TT+ IT T+     T +  ++  ++
Sbjct: 133 IISTTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTIS 182


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 135 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVP 266
           PT ++T TNL +T R      +TTT + +    +TT   T T+P
Sbjct: 188 PTTQQTTTNLPST-RQPTTNQQTTTTLPSTKQPTTTQQTTTTIP 230


>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +3

Query: 156  TNLLTTARTSLILPKTTTLMETATNLSTTV---XITWTVPKADLTSSLPL 296
            T ++TT  T+ I+  T T   T T ++TTV    IT T+    +T++ P+
Sbjct: 1086 TTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITTTDPI 1135


>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKAD 275
           T   TAT    TA T+     TTT   T T  +TT   T T    D
Sbjct: 22  TAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKNND 67


>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
          Length = 587

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +3

Query: 150 TATNLLTTARTSLILPKTTTLMETATNLSTTVXITWT 260
           T T   TT  T+ I   TTT   T TN +TTV  T T
Sbjct: 545 TITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581



 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 135 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXI 251
           PT   T T +     T+ I   TTT+  T TN +TT+ I
Sbjct: 379 PTDFTTITTITNYTTTTTITNYTTTVSTTITNYTTTITI 417


>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1438

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLV 305
           T+K   T +  TA T+     TTT   T T  +TT   T T   A  T ++ ++ V
Sbjct: 30  TIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATA-TTKTITITTV 84


>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
          Length = 382

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 138 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWTVPKADLTSSLPLSLV 305
           T+K   T +  TA T+     TTT   T T  +TT   T T   A  T ++ ++ V
Sbjct: 152 TIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATA-TTKTITITTV 206


>SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +2

Query: 134 ANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 292
           A A  +GY+  DN  Y          + NGY   DN       P   P +K T
Sbjct: 382 AEAHVDGYQTYDNPTYDTEHETHAEAHVNGYPTYDNPTCDTHSPARAPAYKRT 434


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,353,429
Number of Sequences: 59808
Number of extensions: 358325
Number of successful extensions: 1287
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)