Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E17
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    31   1.6  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    31   1.6  
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    31   1.6  
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro...    31   1.6  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    31   1.6  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    31   1.6  
AY060750-1|AAL28298.1|  147|Drosophila melanogaster GH20124p pro...    30   3.7  
AE014297-1848|AAF55052.1|  147|Drosophila melanogaster CG8489-PA...    30   3.7  

>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
            protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350  SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
            D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350  SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p protein.
          Length = 1296

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350  SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1108 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1139


>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
           protein.
          Length = 1026

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350 SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
           S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 838 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 869


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
            isoform B protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350  SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
            isoform A protein.
          Length = 1788

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 350  SRXALGDANGKAKEALEQSRQNIERTAEELRK 445
            S  A  ++ GKAK+A++Q+  NIE   ++L K
Sbjct: 1600 SLAAADESQGKAKDAIQQANSNIELAGQDLEK 1631


>AY060750-1|AAL28298.1|  147|Drosophila melanogaster GH20124p
           protein.
          Length = 147

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 455 QGGPCGAPRPCARCSASTVPKPPWPCRSR 369
           QGGP G PR   + S  T+ KP  PC+S+
Sbjct: 66  QGGPNGPPRRRKKRSFYTMTKPTPPCQSQ 94


>AE014297-1848|AAF55052.1|  147|Drosophila melanogaster CG8489-PA
           protein.
          Length = 147

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 455 QGGPCGAPRPCARCSASTVPKPPWPCRSR 369
           QGGP G PR   + S  T+ KP  PC+S+
Sbjct: 66  QGGPNGPPRRRKKRSFYTMTKPTPPCQSQ 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,185,584
Number of Sequences: 53049
Number of extensions: 510282
Number of successful extensions: 2437
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2428
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)