Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E16
(915 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.060
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 32 0.74
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.74
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 31 0.98
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 1.3
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.7
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 1.7
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 3.0
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 3.0
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 4.0
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 5.2
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 5.2
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 5.2
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 6.9
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 6.9
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 6.9
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 29 6.9
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 35.5 bits (78), Expect = 0.060
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -1
Query: 894 RGGGAXGKXPXTXPFXGVGPFXG 826
RGGGA GK P T PF G PF G
Sbjct: 758 RGGGAYGKTPATRPFYGSWPFAG 780
>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 35.1 bits (77), Expect = 0.080
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -1
Query: 909 FXXXXRGGGAXGKXPXTXPFXGVGPFXG 826
F +GGGA GK P T PF G PF G
Sbjct: 549 FVLRGKGGGAYGKTPATRPFYGSWPFAG 576
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/81 (27%), Positives = 24/81 (29%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPPG G GPPP PP PP G P G+ P
Sbjct: 493 PPPG-AGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPG 551
Query: 832 KXPXPXKXPGXXXFXXGPXPP 894
+ P GP PP
Sbjct: 552 AGQGWGQPPPGAGQGGGPPPP 572
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPG 792
PPPG G PPP + PP PP G P PG
Sbjct: 537 PPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPG 583
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXG 804
PPP G G PP PP PP G P PG G
Sbjct: 547 PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQG 597
Score = 31.5 bits (68), Expect = 0.98
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXGPXGXXGFXX--GXPXXWGKXXXXXGXXGXGXPXPXXRG 718
GGG P G GP G G G WG+ G G P +G
Sbjct: 485 GGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQG 544
Query: 717 XG--XXGGGNGRGPXXXTAFPRGGGXFFXXXKPXXPPPGXGK 598
G G G G G A GG + PPPG G+
Sbjct: 545 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQ 586
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP G G PP PP PP G P G+ P
Sbjct: 514 PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPG 573
Query: 832 KXPXPXKXPGXXXFXXGPXPP 894
PG GP PP
Sbjct: 574 AGQGGPPPPGAG--QEGPPPP 592
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXG 804
PPPG G GPPP PP P G P PG G
Sbjct: 559 PPPG-AGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQG 608
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXF-XPXPG 792
PPPG G GPPP PP PP G + P PG
Sbjct: 570 PPPGAG--QGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGLPPPG 615
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Frame = +1
Query: 652 PPPGK--GGXXXGPPPVSPP----XXSXPPXXRXXXXXSXPPXGGXXFXPXP 789
PPP GG GPPP PP S PP PP G F P P
Sbjct: 387 PPPWSKPGGILPGPPPPGPPMLNMAPSIPPWQTTPGYIPPPPPGFPQFQPPP 438
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXP--GXXXGKXXXXXX 825
PPP P PP + PP PP P P G
Sbjct: 307 PPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPPWATSNSGPKPLMST 366
Query: 826 PXKXPXPXKXPGXXXFXXGPXPP 894
P + P + PG GP PP
Sbjct: 367 PVQRPPGMRPPGAGNGPGGPPPP 389
>SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1
Query: 894 RGGGAXGKXPXTXPFXGVGPFXG 826
+GGGA GK P T PF G PF G
Sbjct: 22 QGGGAYGKTPATRPFYGSWPFAG 44
>SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXG 826
GGGA GK P T PF G PF G
Sbjct: 1 GGGAYGKTPATRPFYGSWPFAG 22
>SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXG 826
GGGA GK P T PF G PF G
Sbjct: 24 GGGAYGKTPATRPFYGSWPFAG 45
>SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXG 826
GGGA GK P T PF G PF G
Sbjct: 406 GGGAYGKTPATRPFYGSWPFAG 427
>SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXG 826
GGGA GK P T PF G PF G
Sbjct: 1 GGGAYGKTPATRPFYGSWPFAG 22
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 655 PPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXP 789
PP GG PPP PP S PP PP G P P
Sbjct: 945 PPPPGGN--APPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPP 987
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPG 792
PPP G PPP S PP PP GG P PG
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGS--APPPG 967
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/87 (27%), Positives = 26/87 (29%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP GG PPP PP S P PP GG P P
Sbjct: 922 PPPPPGGNAPLPPP--PPGGSAP--------SQPPPPGGNAPPPPPPPGGSAPPPGGGAP 971
Query: 832 KXPXPXKXPGXXXFXXGPXPPXXLXKI 912
P P P PP + K+
Sbjct: 972 PLPPPPGGSAPPPPPPPPPPPPPMRKL 998
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/80 (30%), Positives = 28/80 (35%)
Frame = -1
Query: 888 GGAXGKXPXTXPFXGVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGXGX 709
GG G+ P G G G G+ G WG+ G G G G
Sbjct: 257 GGGWGQGPGGGWGRGQGRGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGG------GWGR 310
Query: 708 XGGGNGRGPXXXTAFPRGGG 649
GG GRGP +GGG
Sbjct: 311 MQGGMGRGPGGGWGRMQGGG 330
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/82 (30%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = -1
Query: 888 GGAXGKXPXTXPFXGVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXX-GXGXPXPXXRGXG 712
G G+ P G G G G G WG+ G G G G G
Sbjct: 273 GRGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGMGRGPGGGWGRMQGGGMG 332
Query: 711 XX-GGGNGRGPXXXTAFPRGGG 649
GGG GRGP +GGG
Sbjct: 333 RGPGGGLGRGPGGGWGRMQGGG 354
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 0.74
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPG 792
PPP GPPP PP PP PP G P PG
Sbjct: 363 PPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRG---APPPG 406
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP G PPP PP PP G P G P
Sbjct: 306 PPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPP 365
Query: 832 KXPXPXKXP 858
P P P
Sbjct: 366 PPPPPVGGP 374
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.5 bits (68), Expect = 0.98
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 655 PPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXP 789
PP G GPPP+ P PP PP G P P
Sbjct: 2174 PPPMGAPPSGPPPMGAPPSGPPP--MGTPPSGHPPMGAPPMGPPP 2216
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/53 (30%), Positives = 16/53 (30%), Gaps = 1/53 (1%)
Frame = +2
Query: 737 GXPXPXXPXXXXXX-PQXXGXPXXXPFXPXGPXXGPTPXXGXVXGXXPXAPPP 892
G P P P P G P P P GP P G P PP
Sbjct: 2149 GPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGPPPMGAPPSGPPPMGTPP 2201
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 31.5 bits (68), Expect = 0.98
Identities = 24/83 (28%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Frame = -1
Query: 888 GGAXGKXPXTXPFXGVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGXG- 712
GG G+ P G G G G+ G WG+ G G +G G
Sbjct: 13 GGGWGQGPGGGWGRGQGGGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGRMQGGGM 72
Query: 711 --XXGGGNGRGPXXXTAFPRGGG 649
GGG GRGP + GG
Sbjct: 73 GRGPGGGLGRGPGGGWGRMQEGG 95
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXP 789
PPP G PPP PP + PP PP G P P
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPP----PPPPPPPPPGDGGAPPPP 334
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/70 (24%), Positives = 20/70 (28%)
Frame = +1
Query: 685 PPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPXKXPXPXKXPGX 864
PPP+ PP + PP PP + P P P P P
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPN 216
Query: 865 XXFXXGPXPP 894
P PP
Sbjct: 217 APNPPYPPPP 226
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXG 804
PPP GG G PP PP PP PP GG P P G
Sbjct: 664 PPPPPGGQAGGAPP--PP---PPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP PPP PP S PP + PP P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 832 KXPXP 846
P P
Sbjct: 428 PPPPP 432
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 713 PXPRXXGXGXPXPXXPXXXXXXPQXXGXPXXXPFXPXGPXXGPTPXXGXVXGXXPXAPPP 892
P P P P P PQ P P P P P P P PPP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP PPP PP PP PP P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 832 KXPXP 846
P P
Sbjct: 427 PPPPP 431
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +1
Query: 685 PPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPXKXPXPXKXP 858
PPP SPP PP PP P P P P P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP +G PPP+S P S + P GG P PG P
Sbjct: 332 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPP-PPPPGRRPPSGKINPPPP 390
Query: 832 KXPXPXK 852
P K
Sbjct: 391 PPPAMDK 397
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +2
Query: 713 PXPRXXGXGXPXPXX-PXXXXXXPQXXGXPXXXPFXPXGPXXGPTPXXGXVXGXXPXAPP 889
P R G P P P P G P P G P P G G P PP
Sbjct: 208 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEP--PP 265
Query: 890 PR 895
P+
Sbjct: 266 PK 267
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP +G PPP+S P S + P GG P PG P
Sbjct: 244 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPP-PPPPGRRPPSGKINPPPP 302
Query: 832 KXPXPXK 852
P K
Sbjct: 303 PPPAMDK 309
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +2
Query: 713 PXPRXXGXGXPXPXX-PXXXXXXPQXXGXPXXXPFXPXGPXXGPTPXXGXVXGXXPXAPP 889
P R G P P P P G P P G P P G G P PP
Sbjct: 120 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEP--PP 177
Query: 890 PR 895
P+
Sbjct: 178 PK 179
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +2
Query: 719 PRXXGXGX-PXPXXPXXXXXXPQXXGXPXXXPFXPX-GPXXGPTPXXGXVXGXXPXAPPP 892
P G G P P P P+ P + P GP G P G G P P P
Sbjct: 1198 PNALGAGFIPGPVFPPGAGYGPEFPSGPGPFNYGPMVGPFNGYGPRFGPFNGFGPAGPGP 1257
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPP 723
PPPG GG PPP+ PP
Sbjct: 198 PPPGPGGIPPPPPPIRGGVPPPPP 221
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPP 723
PPP G PPP PP + PP
Sbjct: 200 PPPPPGFPGGAPPPPPPPFGAPPP 223
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPP 723
PPP G G PP PP PP
Sbjct: 199 PPPPPPGFPGGAPPPPPPPFGAPP 222
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/74 (24%), Positives = 22/74 (29%)
Frame = +1
Query: 640 KKXXPPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXX 819
K+ PP P V PP + PP PP G P PG +
Sbjct: 300 KRPGMPPSPSVPHQSQPAV-PPAFATPPRSGASTPSGAPPTGDEGMAPQPGQGQARPSYM 358
Query: 820 XXPXKXPXPXKXPG 861
+ P PG
Sbjct: 359 NKRRQYPAQGGQPG 372
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -1
Query: 846 GVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGXGXXGGGNGRGPXXXTA 667
G G G G G G G G G G G G GGG G G
Sbjct: 770 GGGGGDGGDGGGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGG 829
Query: 666 FPRGGG 649
+ GGG
Sbjct: 830 YGDGGG 835
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = -1
Query: 828 GPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGXGXXGGGNGRGPXXXTAFPRGGG 649
G G G G G G G G G G GGG+G G F GGG
Sbjct: 782 GGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGG 841
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/81 (28%), Positives = 23/81 (28%)
Frame = -1
Query: 891 GGGAXGKXPXTXPFXGVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGXG 712
GGG G G G G G G G G G G G G
Sbjct: 791 GGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGG 850
Query: 711 XXGGGNGRGPXXXTAFPRGGG 649
GGG G G GGG
Sbjct: 851 GGGGGGGGGGGGGGGGGGGGG 871
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXP 720
PPP GG PPP PP P
Sbjct: 653 PPPPPGGGMFPPPPPPPPGGGVP 675
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 28.7 bits (61), Expect = 6.9
Identities = 25/84 (29%), Positives = 28/84 (33%)
Frame = -1
Query: 894 RGGGAXGKXPXTXPFXGVGPFXGPXGXXGFXXGXPXXWGKXXXXXGXXGXGXPXPXXRGX 715
RGGG G + G G G G G+ G G G G G G
Sbjct: 149 RGGG--GYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGS 206
Query: 714 GXXGGGNGRGPXXXTAFPRGGGXF 643
G GGG G G GGG +
Sbjct: 207 GY-GGGGGYGGGGYGGGRSGGGGY 229
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = -1
Query: 750 GXGXPXPXXRGXGXXGGGNGRGPXXXTAFPRGGGXFFXXXKPXXPPPGXGKXXXXXW 580
G G G GGG GR + R GG + P PPP + W
Sbjct: 468 GYGGGSGYGGGSSSRGGGGGRSSSGGNS--RSGGSSYKSSNPPPPPPPRNQPSNQNW 522
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 713 PXPRXXGXGXPXPXXPXXXXXXPQXXGXPXXXPFXPXGPXXGPTPXXGXVXGXXPXAPPP 892
P G G P P P P PF P GP P G + G P PP
Sbjct: 387 PPKEDWGPG-PRGMGPGMGPPRPMGPPGPHGPPFGPRGPPPHGGPPRGPM-GPGPGMPPM 444
Query: 893 R 895
R
Sbjct: 445 R 445
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/80 (26%), Positives = 23/80 (28%)
Frame = +1
Query: 652 PPPGKGGXXXGPPPVSPPXXSXPPXXRXXXXXSXPPXGGXXFXPXPGXXXGKXXXXXXPX 831
PPP PPP PP S PP S PP P
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTPP----PPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQ 739
Query: 832 KXPXPXKXPGXXXFXXGPXP 891
+ P P + PG G P
Sbjct: 740 QPPPPGQLPGQQPGQAGGRP 759
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,399,245
Number of Sequences: 59808
Number of extensions: 233542
Number of successful extensions: 1050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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