Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E12
(934 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 162 1e-39
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 162 1e-39
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 162 1e-39
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 162 1e-39
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 162 1e-39
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 162 1e-39
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 157 7e-38
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 139 2e-32
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 134 4e-31
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 70 1e-11
AJ583818-1|CAE47745.2| 339|Homo sapiens ubiquitin specific prot... 25 2.8
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 162 bits (394), Expect = 1e-39
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 157 bits (380), Expect = 7e-38
Identities = 69/83 (83%), Positives = 73/83 (87%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCST 283
PLA DLLHPS E +KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST
Sbjct: 2 PLARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCST 61
Query: 284 ILCQPTGGRARLTEGCSFRRKQH 352
+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 62 VLCQPTGGKARLTEGCSFRRKQH 84
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 139 bits (336), Expect = 2e-32
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +2
Query: 107 LAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 286
LA DLLHPS E +KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+
Sbjct: 19 LARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTV 78
Query: 287 LCQPTGGRARLTEGCSF 337
LCQPTGG+ARLTEG SF
Sbjct: 79 LCQPTGGKARLTEGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 134 bits (324), Expect = 4e-31
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +2
Query: 116 DLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 295
DLLHPSP E RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60
Query: 296 PTGGRARLT 322
PTGG+ARLT
Sbjct: 61 PTGGKARLT 69
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 70.1 bits (164), Expect = 1e-11
Identities = 31/38 (81%), Positives = 31/38 (81%)
Frame = +2
Query: 104 PLAIDLLHPSPASEXRKHKLKRLVPHPNSYFMDVKCPG 217
PLA DLLHPSP E RKHK KRLV PNSYFMDVKCPG
Sbjct: 2 PLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>AJ583818-1|CAE47745.2| 339|Homo sapiens ubiquitin specific
proteinase 50 protein.
Length = 339
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 60 WSLFPXCCIKXCNHARSQLICCILPL 137
W+L CC+ +A SQ +C ILPL
Sbjct: 47 WNLGNTCCV----NAISQCLCSILPL 68
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 174 CHILTLISWMLSALAVTRLQQFLV 245
C IL L+ + L+ +T LQ+FL+
Sbjct: 63 CSILPLVEYFLTGKYITALQKFLL 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,850,212
Number of Sequences: 237096
Number of extensions: 1820175
Number of successful extensions: 3516
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3492
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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