Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E08
         (1122 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    34   0.24 
03_05_0067 - 20460206-20460703,20461255-20461530                       32   0.95 
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417...    29   6.7  
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813...    29   6.7  
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38...    29   8.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   8.9  
03_05_1081 + 30235677-30236474                                         29   8.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   8.9  

>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPPXXKXXXGGG 936
           PPPPP  +   PPPP  +   GGG
Sbjct: 54  PPPPPPTQPAPPPPPPARSGGGGG 77



 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPPXXKXXXGGG 936
           PPPPP      PPPP      GGG
Sbjct: 53  PPPPPPPTQPAPPPPPPARSGGGG 76


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPP 909
           PPPPP W    PPPP
Sbjct: 4   PPPPPQWAMGPPPPP 18


>12_01_0526 -
           4171313-4171417,4171514-4171597,4171688-4171758,
           4171814-4171891,4174482-4174569,4174659-4174850,
           4174939-4175802
          Length = 493

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPP 909
           PPPPP  E   PPPP
Sbjct: 148 PPPPPPQESTPPPPP 162


>10_08_0936 -
           21679002-21679800,21679893-21680116,21681174-21681361,
           21681505-21682597
          Length = 767

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPPXXKXXXGGG 936
           PPPPP  +   PPPP       GG
Sbjct: 111 PPPPPPTQSHQPPPPVAVRAPRGG 134


>06_01_0039 -
           386576-387098,387173-387468,387744-388067,388165-388276,
           388355-388482,388914-389048,389122-389250,389620-389787,
           389897-390019,390099-390227,390543-390866,390946-392901
          Length = 1448

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPP 909
           PPPPP  E   PPPP
Sbjct: 59  PPPPPNAEPEAPPPP 73


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 867  PPPPXVGKXXPPPP 908
            PPPP +G   PPPP
Sbjct: 1099 PPPPSIGAGAPPPP 1112


>03_05_1081 + 30235677-30236474
          Length = 265

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 867 PPPPXVGKXXPPPP 908
           PPPP +G+  PPPP
Sbjct: 50  PPPPVMGQPVPPPP 63


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 865 PPPPPXWEXXXPPPPXXK 918
           PPPPP  +   PPPP  K
Sbjct: 366 PPPPPGGKKGGPPPPPPK 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,684,956
Number of Sequences: 37544
Number of extensions: 413606
Number of successful extensions: 4275
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3201
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3386386840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)