Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP02_F_E08
(1122 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 32 4.4
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 32 4.4
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 32 4.4
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 32 4.4
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 32 4.4
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 4.4
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 32 4.4
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 32 4.4
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 32 4.4
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 32 4.4
U66615-1|AAC50693.1| 1104|Homo sapiens SWI/SNF complex 155 KDa s... 31 5.8
BC117213-1|AAI17214.1| 1105|Homo sapiens SWI/SNF related, matrix... 31 5.8
BC113465-1|AAI13466.1| 1105|Homo sapiens SWI/SNF related, matrix... 31 5.8
BC050564-1|AAH50564.1| 1105|Homo sapiens SWI/SNF related, matrix... 31 5.8
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 587 RLHQGKGMMPPPPMGMMPPPPP 608
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 462 RLHQGKGMMPPPPMGMMPPPPP 483
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 31.9 bits (69), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 737 KIXXGRGVFPPPXFXXXPPPPP 802
++ G+G+ PPP PPPPP
Sbjct: 88 RLHQGKGMMPPPPMGMMPPPPP 109
>U66615-1|AAC50693.1| 1104|Homo sapiens SWI/SNF complex 155 KDa
subunit protein.
Length = 1104
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 677 PXXPGXPRVXXXXXXPXKKXKIXXGRGVFPPPXFXXXPPPPP 802
P PG P + P + + G++PPP PPPPP
Sbjct: 1047 PTPPGMPPMPGNILGP--RVPLTAPNGMYPPPPQQQPPPPPP 1086
>BC117213-1|AAI17214.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 677 PXXPGXPRVXXXXXXPXKKXKIXXGRGVFPPPXFXXXPPPPP 802
P PG P + P + + G++PPP PPPPP
Sbjct: 1048 PTPPGMPPMPGNILGP--RVPLTAPNGMYPPPPQQQPPPPPP 1087
>BC113465-1|AAI13466.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 677 PXXPGXPRVXXXXXXPXKKXKIXXGRGVFPPPXFXXXPPPPP 802
P PG P + P + + G++PPP PPPPP
Sbjct: 1048 PTPPGMPPMPGNILGP--RVPLTAPNGMYPPPPQQQPPPPPP 1087
>BC050564-1|AAH50564.1| 1105|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1105
Score = 31.5 bits (68), Expect = 5.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 677 PXXPGXPRVXXXXXXPXKKXKIXXGRGVFPPPXFXXXPPPPP 802
P PG P + P + + G++PPP PPPPP
Sbjct: 1048 PTPPGMPPMPGNILGP--RVPLTAPNGMYPPPPQQQPPPPPP 1087
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,858,090
Number of Sequences: 237096
Number of extensions: 2126100
Number of successful extensions: 12117
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9051
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15589897932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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