Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E07
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.60 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.4  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   7.4  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 296 SKTARGTPWNFAYQLWTKDGKEIVKSYFPI-QFRVIFTEQTVKLINKRDHHALKLIDQ 466
           S++ RG   N+     T   KE++   F + +FR+    Q  K+I + DH ALK + +
Sbjct: 632 SRSLRGPELNY-----TTTEKELLGVIFALHKFRIYI--QVTKIIIRTDHQALKFLSR 682


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 515 CWFCLWSHRMQFCCGFV 465
           C F +++  + FCC F+
Sbjct: 171 CAFIIFTMHLLFCCAFI 187


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 546  LENNRVYFKIMSTEDKQYLKLDNTK 620
            +E   VY+K +ST+DK  +K  + K
Sbjct: 1231 VEYYTVYYKPVSTDDKTEVKPTSQK 1255


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 522 TFLLVLSLESPNAILLWFCWSINLRA*WSLLFMSLTV 412
           T+L+    E  +  +LW C S N      +L +S TV
Sbjct: 242 TYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTV 278


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 470 NHNKIAFGDSKDKTSKKVSWKFTPXVGKQQSLLQDHVHRGQT 595
           NH  +  GD   K ++K+   F   +  +   +   +HR  T
Sbjct: 14  NHKNVQVGDLVQKIAQKLQVLFQDQIVDEMVTVLGDLHRKPT 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,374
Number of Sequences: 336
Number of extensions: 3814
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)