Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E07
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346...    31   0.93 
06_01_0616 + 4467439-4467733,4469232-4469294,4469840-4471176,447...    31   1.2  
03_01_0259 - 1996427-1998772                                           31   1.2  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   3.8  

>04_04_0027 +
           22232781-22233051,22234256-22234329,22234471-22234638,
           22234812-22234971,22235062-22235145,22235781-22236078,
           22236158-22236364,22236465-22236735,22236971-22237055,
           22237141-22237182,22237302-22237350,22237825-22237894,
           22238314-22238463,22238592-22238619,22238856-22238990,
           22240693-22241469,22242133-22242192,22242367-22242413
          Length = 991

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +1

Query: 646 TVIAPLTPSNTTGTLSPSMYES--XVMFFVYNREYNSVMTLDEDMAANEDREALGPXGKX 819
           TV+ PL+P N+ G    S Y+S       +YN+       + E++   +D+ A G   K 
Sbjct: 214 TVLIPLSPGNSDGEDDDSEYDSEDDDSEMIYNQRRGKSSVVIEEI-QEDDKPAAGGAQKG 272

Query: 820 SGYPQXL-HGTSSLLXVVVKGLP 885
           S   Q   +G  S L +VV+  P
Sbjct: 273 SNKKQTSENGDDSKLQLVVRTPP 295


>06_01_0616 +
           4467439-4467733,4469232-4469294,4469840-4471176,
           4472719-4473086,4473526-4473559,4473978-4474421
          Length = 846

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/57 (36%), Positives = 31/57 (54%)
 Frame = +1

Query: 622 VLVMTVSSTVIAPLTPSNTTGTLSPSMYESXVMFFVYNREYNSVMTLDEDMAANEDR 792
           VL++T S T  A LT   T G L P++ E     +V  ++ + V  + +DM  NEDR
Sbjct: 584 VLIITTSYT--ANLTSMLTVGQLQPTINELKKGDYVGYQQGSFVQNILKDMGFNEDR 638


>03_01_0259 - 1996427-1998772
          Length = 781

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 398 IFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSK 502
           I  ++ V++ N   HHALKLI + +  +I  GDSK
Sbjct: 732 ILVKKNVRICN-HCHHALKLISRYSGRRIVVGDSK 765


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 466 LVDQLEGVMVPFVYELDSLLGEDHSKLDG 380
           +V    GVM P + +L  LLGE+++KL G
Sbjct: 7   IVGATTGVMKPLLSKLTKLLGEEYAKLKG 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,691,816
Number of Sequences: 37544
Number of extensions: 430145
Number of successful extensions: 1207
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)