Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP02_F_E07
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>AK055595-1|BAB70966.1|  729|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31033 fis, clone HSYRA1000168, weakly similar to
           HYPOTHETICAL HELICASE C28H8.3 IN CHROMOSOME III. ).
          Length = 729

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 492 VTPKTKPARKSPGSLPPXLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIY 647
           VT  T+P   S G+    L+N + +     ++ K +LK D  K   +D +++
Sbjct: 103 VTQTTRPKEDSSGASGEILQNTKPHQITKKSKKKSFLKEDQNKAQQNDDLLF 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,067,658
Number of Sequences: 237096
Number of extensions: 2403758
Number of successful extensions: 5681
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5681
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)